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Report for CCDS14368.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14368.1 Public Homo sapiens X PAGE5 24 110 108 CCDS HistoryNCBI Gene:90737Re-query CCDS DB by CCDS ID:14368.1Re-query CCDS DB by GeneID:90737See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14368.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000289619.9 ENSP00000289619.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000289619.9Link to Ensembl Protein Viewer:ENSP00000289619.5Re-query CCDS DB by Nucleotide ID:ENST00000289619Re-query CCDS DB by Protein ID:ENSP00000289619
Original member Current member NCBI NM_130467.5 NP_569734.2 Accepted alive Link to Nucleotide Sequence:NM_130467.5Link to Protein Sequence:NP_569734.2Re-query CCDS DB by Nucleotide ID:NM_130467Re-query CCDS DB by Protein ID:NP_569734Link to BLAST:NP_569734.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_569734.2 130 Q96GU1-1 130 100% 0 0

Chromosomal Locations for CCDS 14368.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 55220600 55220651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 55221375 55221463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 55221767 55221875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 55222621 55222746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 55223987 55224003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGCAGGCGCCATGGGCCGGTAATCGTGGCTGGGCTGGAACGAGGGAGGAAGTGAGAGATATGAGTGAGC
ATGTAACAAGATCCCAATCCTCAGAAAGAGGAAATGACCAAGAGTCTTCCCAGCCAGTTGGACCTGTGAT
TGTCCAGCAGCCCACTGAGGAAAAACGTCAAGAAGAGGAACCACCAACTGATAATCAGGGTATTGCACCT
AGTGGGGAGATCAAAAATGAAGGAGCACCTGCTGTTCAAGGGACTGATGTGGAAGCTTTTCAACAGGAAC
TGGCTCTGCTTAAGATAGAGGATGCACCTGGAGATGGTCCTGATGTCAGGGAGGGGACTCTGCCCACTTT
TGATCCCACTAAAGTGCTGGAAGCAGGTGAAGGGCAACTATAG

Translation (130 aa):
MQAPWAGNRGWAGTREEVRDMSEHVTRSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAP
SGEIKNEGAPAVQGTDVEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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