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Report for CCDS94662.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94662.1 Public Homo sapiens X CUL4B 24 110 108 CCDS HistoryNCBI Gene:8450Re-query CCDS DB by CCDS ID:94662.1Re-query CCDS DB by GeneID:8450See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94662.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371323.3 ENSP00000360374.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371323.3Link to Ensembl Protein Viewer:ENSP00000360374.3Re-query CCDS DB by Nucleotide ID:ENST00000371323Re-query CCDS DB by Protein ID:ENSP00000360374
Original member Current member NCBI NM_001369145.1 NP_001356074.1 Accepted alive Link to Nucleotide Sequence:NM_001369145.1Link to Protein Sequence:NP_001356074.1Re-query CCDS DB by Nucleotide ID:NM_001369145Re-query CCDS DB by Protein ID:NP_001356074Link to BLAST:NP_001356074.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001356074.1 717 Q13620-3 717 100% 0 0

Chromosomal Locations for CCDS 94662.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 120526761 120526856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120530102 120530254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120532422 120532594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120534481 120534586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120535830 120535943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120536927 120537034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120538124 120538209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120538660 120538770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120539268 120539372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120540370 120540562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120541602 120541720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120542966 120543033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120543727 120543809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120544114 120544203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120544481 120544643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120545444 120545517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120546547 120546616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120547136 120547239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120557924 120558039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 120559779 120559800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2154 nt):
ATGATTGATCCGGATTTTGCAGATAAGCCTAAATTACCAGAAAACTACACAGATGAAACCTGGCAAAAAC
TGAAAGAAGCAGTGGAAGCTATTCAGAATAGTACTTCAATTAAGTACAATTTAGAAGAACTCTACCAGGC
TGTAGAAAATCTCTGTTCTTACAAGATTTCTGCAAACTTGTACAAACAGCTGAGACAGATCTGCGAAGAT
CACATCAAAGCACAGATTCATCAATTCAGAGAGGATTCATTGGATAGCGTTCTTTTTTTAAAGAAGATTG
ATAGATGCTGGCAAAACCATTGCAGACAAATGATCATGATCAGGAGCATTTTTTTGTTTCTGGATAGAAC
TTACGTTCTTCAGAATTCAATGCTACCCTCCATTTGGGACATGGGACTGGAGTTATTTAGGGCTCATATT
ATAAGTGATCAGAAAGTGCAGAATAAGACAATTGATGGCATTCTTCTCTTGATTGAGAGGGAAAGGAATG
GTGAAGCAATTGATAGAAGTTTACTTCGAAGCCTTTTAAGCATGCTGTCTGATTTGCAAATTTATCAAGA
TTCTTTTGAACAACGATTTTTGGAAGAAACTAACCGGCTCTATGCAGCTGAAGGCCAAAAATTAATGCAA
GAAAGAGAGGTTCCTGAATATCTACATCATGTTAACAAACGTCTAGAAGAAGAAGCAGACAGACTTATTA
CTTACTTAGATCAGACCACCCAGAAGTCATTAATTGCTACTGTAGAAAAACAACTTCTAGGTGAACACTT
AACAGCAATTCTTCAGAAAGGTTTAAATAACCTCCTTGATGAAAACCGAATTCAAGATTTGTCTCTTCTG
TATCAGCTCTTCAGTAGAGTTCGAGGTGGAGTTCAGGTTCTTTTGCAGCAGTGGATCGAATATATCAAGG
CATTTGGCAGCACTATTGTAATTAATCCTGAAAAAGATAAAACCATGGTTCAAGAATTGCTGGATTTTAA
AGATAAGGTTGACCATATAATTGATATCTGCTTTCTGAAGAATGAGAAATTTATCAATGCCATGAAAGAA
GCATTTGAAACGTTCATTAACAAAAGACCAAATAAACCAGCTGAACTTATAGCTAAGTATGTAGATTCAA
AACTTCGTGCAGGCAACAAAGAAGCTACAGATGAAGAACTTGAGAAAATGTTGGATAAAATTATGATCAT
ATTTAGATTTATCTATGGCAAGGATGTTTTTGAGGCCTTCTATAAGAAAGATTTAGCCAAGCGCCTGTTA
GTCGGAAAGAGTGCATCTGTAGATGCTGAAAAATCAATGCTGTCCAAACTTAAACATGAATGCGGAGCTG
CTTTCACCAGCAAACTTGAAGGAATGTTTAAAGACATGGAACTTTCTAAAGACATCATGATTCAGTTCAA
ACAGTATATGCAGAATCAGAATGTTCCGGGAAATATTGAGTTAACTGTGAATATCCTGACAATGGGCTAT
TGGCCGACATATGTGCCTATGGAAGTTCATTTACCACCAGAGATGGTAAAACTTCAGGAGATTTTCAAGA
CATTTTACCTAGGCAAACATAGTGGCAGGAAACTTCAGTGGCAGTCAACCCTAGGACACTGTGTGTTAAA
AGCAGAATTTAAAGAGGGTAAAAAGGAACTCCAGGTCTCTCTTTTTCAAACACTGGTGCTGCTAATGTTT
AATGAGGGAGAGGAGTTCAGTTTAGAAGAGATCAAGCAGGCAACTGGAATAGAGGATGGAGAGTTAAGGA
GAACACTGCAGTCATTAGCCTGTGGCAAAGCTAGAGTTCTGGCGAAAAATCCAAAGGGCAAAGACATTGA
AGATGGTGACAAGTTCATTTGTAATGATGATTTCAAACATAAACTTTTCAGGATAAAGATCAATCAAATC
CAGATGAAAGAAACGGTTGAAGAACAAGCAAGCACTACAGAAAGAGTATTTCAAGACAGACAGTATCAAA
TTGATGCTGCAATTGTTCGAATTATGAAGATGAGAAAGACACTTAGCCACAATCTCCTTGTTTCAGAAGT
GTACAACCAGTTGAAATTTCCAGTAAAGCCTGCTGATCTTAAGAAGAGAATAGAATCTTTAATTGACCGG
GACTACATGGAAAGAGATAAAGAAAATCCAAACCAGTACAACTATATTGCATAG

Translation (717 aa):
MIDPDFADKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICED
HIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHI
ISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQ
EREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLL
YQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKE
AFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLL
VGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGY
WPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMF
NEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQI
QMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDR
DYMERDKENPNQYNYIA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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