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Report for CCDS76030.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76030.1 Public Homo sapiens X CT45A3 24 110 108 CCDS HistoryNCBI Gene:441519Re-query CCDS DB by CCDS ID:76030.1Re-query CCDS DB by GeneID:441519See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76030.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000597510.6 ENSP00000471418.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000597510.6Link to Ensembl Protein Viewer:ENSP00000471418.1Re-query CCDS DB by Nucleotide ID:ENST00000597510Re-query CCDS DB by Protein ID:ENSP00000471418
Original member Current member EBI ENST00000598716.3 ENSP00000471571.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000598716.3Link to Ensembl Protein Viewer:ENSP00000471571.2Re-query CCDS DB by Nucleotide ID:ENST00000598716Re-query CCDS DB by Protein ID:ENSP00000471571
Original member Current member NCBI NM_001017435.2 NP_001017435.1 Accepted alive Link to Nucleotide Sequence:NM_001017435.2Link to Protein Sequence:NP_001017435.1Re-query CCDS DB by Nucleotide ID:NM_001017435Re-query CCDS DB by Protein ID:NP_001017435Link to BLAST:NP_001017435.1
Original member Current member NCBI NM_001370148.2 NP_001357077.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001370148.2Link to Protein Sequence:NP_001357077.1Re-query CCDS DB by Nucleotide ID:NM_001370148Re-query CCDS DB by Protein ID:NP_001357077Link to BLAST:NP_001357077.1
Original member Current member NCBI NM_001370149.1 NP_001357078.1 Accepted alive Link to Nucleotide Sequence:NM_001370149.1Link to Protein Sequence:NP_001357078.1Re-query CCDS DB by Nucleotide ID:NM_001370149Re-query CCDS DB by Protein ID:NP_001357078Link to BLAST:NP_001357078.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017435.1 189 Q8NHU0 189 100% 0 0
NP_001357077.1 189 Q8NHU0 189 100% 0 0
NP_001357078.1 189 Q8NHU0 189 100% 0 0

Chromosomal Locations for CCDS 76030.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 135760352 135760409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135761634 135761727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135762108 135762356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135764276 135764444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGACCGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAAACGTCCCAGGGAATGTGACA
GTCCTTCGTATCAGAAAAGGCAGAGGATGGCCCTGTTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTAT
TGCAGGCTCTGCCATGTCCAAAGAAAAGAAGCTTATGACAGGACATGCTATTCCACCCAGCCAATTGGAT
TCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATAGGATGATGCAGAAACCTGGTAGCAATGCACCTG
TGGGAGGAAACGTTACCAGCAGTTTCTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTCCTCTCCCAA
AAGCCAACGAGAAATTAATGCTGATATAAAACGTAAATTAGTGAAGGAACTCCGATGCGTTGGACAAAAA
TATGAAAAAATCTTCGAAATGCTTGAAGGAGTGCAAGGACCTACTGCAGTCAGGAAGCGATTTTTTGAAT
CCATCATCAAGGAAGCAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGAAACTGAAACG
TATGATTTGA

Translation (189 aa):
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLD
SQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQK
YEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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