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Report for CCDS77238.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77238.1 Public Homo sapiens 19 CNN1 24 110 108 CCDS HistoryNCBI Gene:1264Re-query CCDS DB by CCDS ID:77238.1Re-query CCDS DB by GeneID:1264See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77238.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535659.6 ENSP00000442031.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535659.6Link to Ensembl Protein Viewer:ENSP00000442031.1Re-query CCDS DB by Nucleotide ID:ENST00000535659Re-query CCDS DB by Protein ID:ENSP00000442031
Original member Current member EBI ENST00000592923.5 ENSP00000468259.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000592923.5Link to Ensembl Protein Viewer:ENSP00000468259.1Re-query CCDS DB by Nucleotide ID:ENST00000592923Re-query CCDS DB by Protein ID:ENSP00000468259
Original member Current member NCBI NM_001308341.2 NP_001295270.1 Accepted alive Link to Nucleotide Sequence:NM_001308341.2Link to Protein Sequence:NP_001295270.1Re-query CCDS DB by Nucleotide ID:NM_001308341Re-query CCDS DB by Protein ID:NP_001295270Link to BLAST:NP_001295270.1
Original member Current member NCBI NM_001308342.2 NP_001295271.1 Accepted alive Link to Nucleotide Sequence:NM_001308342.2Link to Protein Sequence:NP_001295271.1Re-query CCDS DB by Nucleotide ID:NM_001308342Re-query CCDS DB by Protein ID:NP_001295271Link to BLAST:NP_001295271.1

Chromosomal Locations for CCDS 77238.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 11541163 11541197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11546675 11546741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11546832 11546969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11547797 11547907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11549323 11549469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 11549550 11549795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGGACGGCCTCAAAGATGGCATCATTCTTTGCGAATTCATCAATAAGCTGCAGCCAGGCTCCGTGAAGA
AGATCAATGAGTCAACCCAAAATTGGCACCAGCTGGAGAACATCGGCAACTTCATCAAGGCCATCACCAA
GTATGGGGTGAAGCCCCACGACATTTTTGAGGCCAACGACCTGTTTGAGAACACCAACCATACACAGGTG
CAGTCCACCCTCCTGGCTTTGGCCAGCATGGCGAAGACGAAAGGAAACAAGGTGAACGTGGGAGTGAAGT
ACGCAGAGAAGCAGGAGCGGAAATTCGAGCCGGGGAAGCTAAGAGAAGGGCGGAACATCATTGGGCTGCA
GATGGGCACCAACAAGTTTGCCAGCCAGCAGGGCATGACGGCCTATGGCACCCGGCGCCACCTCTACGAC
CCCAAGCTGGGCACAGACCAGCCTCTGGACCAGGCGACCATCAGCCTGCAGATGGGCACCAACAAAGGAG
CCAGCCAGGCTGGCATGACTGCGCCAGGGACCAAGCGGCAGATCTTCGAGCCGGGGCTGGGCATGGAGCA
CTGCGACACGCTCAATGTCAGCCTGCAGATGGGCAGCAACAAGGGCGCCTCGCAGCGGGGCATGACGGTG
TATGGGCTGCCACGCCAGGTCTACGACCCCAAGTACTGTCTGACTCCCGAGTACCCAGAGCTGGGTGAGC
CCGCCCACAACCACCACGCACACAACTACTACAATTCCGCCTAG

Translation (247 aa):
MDGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQV
QSTLLALASMAKTKGNKVNVGVKYAEKQERKFEPGKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYD
PKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTV
YGLPRQVYDPKYCLTPEYPELGEPAHNHHAHNYYNSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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