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Report for CCDS26776.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26776.1 Public Mus musculus 13 Plpp1 23 108 98 CCDS HistoryNCBI Gene:19012Re-query CCDS DB by CCDS ID:26776.1Re-query CCDS DB by GeneID:19012See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26776.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000016144.11 ENSMUSP00000016144.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000016144.11Link to Ensembl Protein Viewer:ENSMUSP00000016144.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000016144Re-query CCDS DB by Protein ID:ENSMUSP00000016144
Original member Current member NCBI NM_008247.3 NP_032273.1 Accepted alive Link to Nucleotide Sequence:NM_008247.3Link to Protein Sequence:NP_032273.1Re-query CCDS DB by Nucleotide ID:NM_008247Re-query CCDS DB by Protein ID:NP_032273Link to BLAST:NP_032273.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032273.1 284 Q61469-2 284 100% 0 0

Chromosomal Locations for CCDS 26776.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 112801209 112801266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112834859 112835013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112856746 112857026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112859644 112859701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112866796 112866972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 112867443 112867568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (855 nt):
ATGTTCGACAAGACGCGGCTGCCGTACGTGGCCCTCGATGTGATTTGCGTGTTGCTGGCTGCCATGCCTA
TGACTATTTTAAAATTGGGCAAAGTATATCCATTTCAGAGGGGCTTTTTCTGTACTGACAACAGCGTGAA
GTACCCGTACCATGACAGTACCATCCCGTCCCGTATACTCGCCATACTGGGGCTTGGCTTACCCATTTTC
TCTATGAGTATTGGAGAATCTCTGTCTGTTTACTTTAATGTCTTGCATTCGAATTCCTTTGTCGGCAATC
CCTACATAGCCACCATTTACAAAGCCGTCGGAGCCTTTTTGTTCGGAGTCTCAGCTAGTCAGTCCTTGAC
TGACATCGCTAAGTATACTATAGGCAGTTTGCGGCCGCACTTCTTGGCTATCTGTAACCCAGACTGGTCA
AAAATCAACTGCAGTGATGGCTATATTGAGGACTACATATGTCAAGGGAATGAAGAGAAAGTCAAGGAGG
GCAGGTTGTCTTTCTACTCGGGACACTCTTCATTCTCTATGTACTGCATGCTGTTTGTCGCACTTTATCT
TCAAGCCAGGATGAAGGGAGACTGGGCAAGACTCTTACGACCCATGCTCCAGTTTGGGCTCATTGCTTTT
TCCATATATGTGGGCCTTTCTCGAGTGTCTGACTACAAACACCACTGGAGTGACGTCACAGTTGGACTCA
TTCAGGGAGCTGCTATGGCTATACTGGTTGCTTTGTATGTATCCGATTTCTTCAAGGACACACATTCTTA
CAAAGAGAGAAAGGAAGAGGATCCACACACGACTCTCCATGAAACCGCCAGTTCACGGAACTACTCAACC
AATCACGAGCCCTGA

Translation (284 aa):
MFDKTRLPYVALDVICVLLAAMPMTILKLGKVYPFQRGFFCTDNSVKYPYHDSTIPSRILAILGLGLPIF
SMSIGESLSVYFNVLHSNSFVGNPYIATIYKAVGAFLFGVSASQSLTDIAKYTIGSLRPHFLAICNPDWS
KINCSDGYIEDYICQGNEEKVKEGRLSFYSGHSSFSMYCMLFVALYLQARMKGDWARLLRPMLQFGLIAF
SIYVGLSRVSDYKHHWSDVTVGLIQGAAMAILVALYVSDFFKDTHSYKERKEEDPHTTLHETASSRNYST
NHEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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