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Report for CCDS26414.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26414.1 Public Mus musculus 13 Mboat1 23 108 98 CCDS HistoryNCBI Gene:218121Re-query CCDS DB by CCDS ID:26414.1Re-query CCDS DB by GeneID:218121See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26414.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047311.15 ENSMUSP00000045441.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047311.15Link to Ensembl Protein Viewer:ENSMUSP00000045441.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000047311Re-query CCDS DB by Protein ID:ENSMUSP00000045441
Original member NCBI NM_153546.4 NP_705774.1 Updated not alive Link to Nucleotide Sequence:NM_153546.4Link to Protein Sequence:NP_705774.1Re-query CCDS DB by Nucleotide ID:NM_153546Re-query CCDS DB by Protein ID:NP_705774
Current member NCBI NM_153546.5 NP_705774.1 Accepted alive Link to Nucleotide Sequence:NM_153546.5Link to Protein Sequence:NP_705774.1Re-query CCDS DB by Nucleotide ID:NM_153546Re-query CCDS DB by Protein ID:NP_705774Link to BLAST:NP_705774.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705774.1 492 Q8BH98 492 100% 0 0

Chromosomal Locations for CCDS 26414.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 30136667 30136762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30194536 30194681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30195710 30195787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30202325 30202420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30219636 30219691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30222374 30222428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30224383 30224566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30226273 30226465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30231964 30232067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30235690 30235754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30237963 30238095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30241164 30241315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30245349 30245469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGGCAGCACGGCCGCCCGCCAGCCTCTCTTACCGTACCACCGGCTCCACCTGCCTGCACCCGCTCAGCC
AGCTCCTGGGCATCCCGCTGGATCAGGTTAACTTTGTGGCTTGCCAGCTCTTTGCCTTGTCTGCTGCTTT
CTGGTTCAGAATCTACTTACATCCTGGTAAAGCCAGCCCTGAGGTCCGGCACACCTTGGCCACCATTTTG
GGCATCTATTTTGTTGTGTTTTGTTTTGGTTGGTATGCTGTACATCTCTTTGTGCTGGTGTTGATGTGTT
ATGGGGTCATGGTCACTGCAAGTGTATCCAATATTCACAGGTATTCCTTTTTTGTAGCCATGGGCTACCT
TACGATATGCCACATCAGCCGCATTTACATCTTCCACTATGGAATTCTCACTACAGATTTTTCTGGGCCC
CTGATGATTGTCACTCAGAAGATCACGACGTTGGCTTTCCAAGTTCATGATGGATTGGGTCGAAAAGCTG
AAGACCTTTCTGCTGAGCAACACCGACTTGCTGTGAAAGCGAAGCCCTCGCTTCTGGAATACTTAAGCTA
CCATCTCAACTTTATGAGTGTCATAGCCGGCCCTTGCAACAATTTCAAGGACTACGTAGCCTTCATCGAA
GGGAGACATATACACATGAAGTTGCTGGAAGTGAACTGGACGCAAAGGGGTTTCCAGAGTTTGCCAGAGC
CTTCTCCCATGGGAGCTGTGATACAGAAGTTGTGTGTGACCTTGATGTCTCTCCTGTTGTTTTTGACGCT
CTCCAAGTCCTTTCCCGTCACCTTCCTTATTGATGACTGGTTTGTACATAAGGCCAACTTTCTGAGTCGT
CTCTGGTACTTATATGTCGTCATGCAAGCCGCAAAGCCCAAGTATTACTTTGCGTGGACATTAGCAGATG
CGGTGCACAATGCAGCTGGATTCGGGTTCAATGGCATGGACACGGATGGGAAGTCTCGCTGGGATTTACT
ATCTAACCTGAACATCTGGAAGATTGAGACTGCCACGAGTTTCAAAATGTACTTGGAAAACTGGAATATT
CAGACATCTACGTGGCTGAAATGTGTGTGCTATGAGCGGGTTCCCTGGTACCCCACAGTGCTCACCTTCC
TCCTGTCTGCTCTGTGGCACGGCGTCTACCCTGGATACTACTTCACATTCCTAACTGGAGTCCCTGTCAC
ATTGGCAGCCAGAGCGGTGAGGAACAACTACAGACACCACTTCCTCTCTTCCAAAGCTCGAAAGATTGCC
TATGACGTGGTGACCTGGGCTGTCACTCAGTTGGCTGTCTCTTACACGGCAGCGCCTTTCGTCATGTTGG
CAGTCGAGCCAACCATCAGTTTATACAAGTCCGTGTTCTTTTTTTTACACATCATATGTCTGCTGATAAT
CCTCTTTCTGCCAATCAAACCACACCAGCCTCAAAGGCAGTCTCGGAGTCCAAATTCTGTAAAGAAGAAG
GCAGACTGA

Translation (492 aa):
MAARPPASLSYRTTGSTCLHPLSQLLGIPLDQVNFVACQLFALSAAFWFRIYLHPGKASPEVRHTLATIL
GIYFVVFCFGWYAVHLFVLVLMCYGVMVTASVSNIHRYSFFVAMGYLTICHISRIYIFHYGILTTDFSGP
LMIVTQKITTLAFQVHDGLGRKAEDLSAEQHRLAVKAKPSLLEYLSYHLNFMSVIAGPCNNFKDYVAFIE
GRHIHMKLLEVNWTQRGFQSLPEPSPMGAVIQKLCVTLMSLLLFLTLSKSFPVTFLIDDWFVHKANFLSR
LWYLYVVMQAAKPKYYFAWTLADAVHNAAGFGFNGMDTDGKSRWDLLSNLNIWKIETATSFKMYLENWNI
QTSTWLKCVCYERVPWYPTVLTFLLSALWHGVYPGYYFTFLTGVPVTLAARAVRNNYRHHFLSSKARKIA
YDVVTWAVTQLAVSYTAAPFVMLAVEPTISLYKSVFFFLHIICLLIILFLPIKPHQPQRQSRSPNSVKKK
AD


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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