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Report for CCDS21697.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21697.1 Public Mus musculus 7 Or5p54 23 108 98 CCDS HistoryNCBI Gene:258488Re-query CCDS DB by CCDS ID:21697.1Re-query CCDS DB by GeneID:258488See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21697.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054434.3 ENSMUSP00000055931.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054434.3Link to Ensembl Protein Viewer:ENSMUSP00000055931.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000054434Re-query CCDS DB by Protein ID:ENSMUSP00000055931
Original member Current member NCBI NM_146495.1 NP_666706.1 Accepted alive Link to Nucleotide Sequence:NM_146495.1Link to Protein Sequence:NP_666706.1Re-query CCDS DB by Nucleotide ID:NM_146495Re-query CCDS DB by Protein ID:NP_666706Link to BLAST:NP_666706.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666706.1 310 Q8VFC9 310 100% 0 0

Chromosomal Locations for CCDS 21697.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107954643 107955575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGAATGGTGGAAACCATACCAGCATGACAGAGTTATTCATTTTGGGACCAACAGAGGACCCTACATTCT
GTATAGCCTTTTTTGTGATATTTCTAGGAGTATACATGGTCACTTTAGTAGGCAATATCAGCATCATCAC
ATTGATAAGAATTTCCTCCCAGCTGCACACACCAGTGTATCTATTCCTCAACCACCTGGCTTTTGTAGAC
ATTTTATATTCAACCTTGGTCTCGGTTATAATGCTTATGGAGCTCCTTGAACATGAGCTAGCCTTACCTG
TAGCTGCCTGTGCAGCTGAGCTCTGTATCACAGTATTATTTGGGTCATCTGAGTGCTTCCTACTGGCTGC
CATGGCCTATGATTGCTATGTAGCAATCTGTTCACCTCTCCTGTATTCGACACTCATGTCCTCTAGAGTC
TGTTTTCTATTGTTGGGAATGTCCTATGTTGGTGGCTGCATGAATGGTTGGATATTTACTGGCTGTTTGT
TAAATCTGTCCTTTTATGGACCATATCAGATAGATCACTTTTTCTGTGACTTCTCCCCTTTGCTGAAACT
TTCCTGCTCAGATGTTTCCATTATTGGAATCATCCCGTCTATCTCTTCTGGCTCCATTATTGTGGTGACA
GTTCTTGTCATAGCTGTCTTCTACATCTGCATACTTATGACCATCCTTAAGATGCACTCCACTGATGGAT
GCCACAAGGCCTTCTCCACCTGCAACTCCTACCTCACTGCAGTCACTCTCTACTATGGGACCATTACTTT
TATTTATGTGATGCCCAAGTCGAACTACTCTACTGAAAAGAACAAGGTGCTTTCTGAATTCTACACAGTG
GTGATTCCTATGCTCAACCACCTTATCTATAGTCTGAAGAACAGAGATGTAAAAGATGCTCTGAGGAAGG
CAATTGTCAGAGTATATACATAG

Translation (310 aa):
MNGGNHTSMTELFILGPTEDPTFCIAFFVIFLGVYMVTLVGNISIITLIRISSQLHTPVYLFLNHLAFVD
ILYSTLVSVIMLMELLEHELALPVAACAAELCITVLFGSSECFLLAAMAYDCYVAICSPLLYSTLMSSRV
CFLLLGMSYVGGCMNGWIFTGCLLNLSFYGPYQIDHFFCDFSPLLKLSCSDVSIIGIIPSISSGSIIVVT
VLVIAVFYICILMTILKMHSTDGCHKAFSTCNSYLTAVTLYYGTITFIYVMPKSNYSTEKNKVLSEFYTV
VIPMLNHLIYSLKNRDVKDALRKAIVRVYT


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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