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Report for CCDS16937.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16937.1 Public Mus musculus 2 Zfp341 23 108 98 CCDS HistoryNCBI Gene:228807Re-query CCDS DB by CCDS ID:16937.1Re-query CCDS DB by GeneID:228807See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 16937.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081926.12 ENSMUSP00000080596.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081926.12Link to Ensembl Protein Viewer:ENSMUSP00000080596.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000081926Re-query CCDS DB by Protein ID:ENSMUSP00000080596
Original member Current member NCBI NM_199304.1 NP_955008.2 Accepted alive Link to Nucleotide Sequence:NM_199304.1Link to Protein Sequence:NP_955008.2Re-query CCDS DB by Nucleotide ID:NM_199304Re-query CCDS DB by Protein ID:NP_955008Link to BLAST:NP_955008.2

Chromosomal Locations for CCDS 16937.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 154613372 154613402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154621753 154621863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154624855 154625051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154626778 154626927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154627888 154628133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154628800 154628995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154630409 154630499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154632279 154632469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154634087 154634277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154638014 154638222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154641316 154641412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154641982 154642114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154643489 154643600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154643787 154643857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 154645624 154646138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2541 nt):
ATGGCGCAGGCGATCTTCGAGGCCCTGGAGGGAATGGACAATCAAACGGTTCTGGCCGTCCAGTCCTTAC
TGGATGGCCAAGGAGCAGTCCCTGACCCCACAGGACAAAGTGTAAATGCGCCACCTGCCATCCAGCCACT
GGATGACGAGGATGTCTTTCTCTGCGGGAAGTGTAAAAAGCAGTTCAACTCACTGCCAGCCTTCATGACC
CACAAGCGTGAACAGTGCCAGGCAAACGCCCCTGCCCTGGCCACAGTCTCGCTGGCTACCAACAGCATCT
ATACACCGTCAGCAGCACCCGCTGCCGTCCAGCAGGCCCCACCTCCTGCCAACCGCCAGATCTCCACGTA
CATCACAGTGCCCCCCTCCCCACTGATCCAGACCCTGGTGCAAGGGAACATCTTGGTGAGCGATGATGTG
CTTATGTCTGCCATGTCTGCCTTCACATCCCTGGACCAGCCAATGCCTCCAGGGCCCCCACCTGTGCAGA
ACAGCTTGAACATGCATCCTGTGCCCAATTACCTCACCCAGCCTCCACCCCCTCCTCCACCCCCTCCGCC
TCTCCCCCCACCCCCCCAGCCTCCTCCTCCCCCACCCCAGACTCTGGGCCCTTCTGGGCGCTCCAACCCT
GTTGGGAACAGTGTGGTGGAGGTGTACAATGCTGCTGCTCCCATGGCTGGGAACGGAACGGTGGAGATCC
AGGCGCTGGGGATGCAGCCGTACCCGCCCCTGGAGGTACCAAGCCAGTGTGTGGAGGCTCCAGTGTACCC
CACTCCCCCAGTGTACAGCCCTGGCAAGCAGGAATTCAAACCCAAAGGACCCAGTTCCACTGCCCCCATG
ACCAATGCAACTGGGAGCACGGTGGCCACCTTTGACTCCCCACCAACGTTGAAGACCAGACGTGCTAAAG
GTGCCAGTGGACTCCCAGAAGCTGCAGGGAAGCCAAAAGCTCAGAAACTCAAGTGCTCCTACTGTGACAA
GTCCTTCACCAAGAACTTTGATCTTCAGCAGCATATCCGAAGCCACACAGGGGAGAAGCCCTTCCAGTGC
ATTGCGTGTGGCCGTGCCTTTGCCCAGAAGTCTAACGTCAAGAAGCACATGCAGACTCATAAGGTGTGGC
CTCCAGGGCGAAGTGGCGGCACAGTCTCCCGAAACTCTGTGACCGTACAAGTCATGGCTTTGAACCCCAA
CAGGCAGGAAGAAGAAGACACGGGGTTGGGTCAGTCACTGTCCAGTACCACACAGCCCCAGGCCTTGCCC
ACGGCAGGTGAGGATGAAGGTGACAAGCCAGAGGCCAAGCAGGTGGTCCTGATCGACAGCTCTTACCTGT
GTCAGTTCTGCCCCAGCAAGTTCAGCACCTACTTCCAGCTCAAGTCCCACATGATTCAGCACAAGAAGGA
GCAGGTGTACAAGTGCGTGGTCAAAAGCTGTGCCCAGATGTTCCCCAAGCTGGACACCTTTCTGGAGCAC
ATCAGAAGCCACCAGGAGGAGCTGAGCTATCGCTGCCATCTCTGTAGCAAGGACTTCCCCTCACTGTATG
ACCTGGGCGTACACCAGTACTCCCACAGCCTCCTGCCGCAGCACAGCCCCAAGAAGGACAGCACCGTCTA
CAAGTGTGTCAAGTGTGTCAACAAATACTCCACTCCCGAGGCCTTGGAGCACCACGTGCAGACGGCCACT
CATAGCTTCCCCTGCCCGCACTGCCAGAAGGTCTTCCCCTGTGAACGCTACCTGCGGCGTCACTTACCCA
CCCATGGCAGTGGTGGCCGATTCAGGTGCCAGATCTGTAAGAAGTTCTTCCGGAAGGAGCACTACCTCAA
GCTACACGCCCACATCCACTCAGGTGAGAAGCCCTACAAATGCTCAGTGTGTGAGTCTGCCTTCAACCGC
AAAGACAAGCTGAAGAGACACATGCTGATCCACGAGCCCTTCAAGAAATACAAATGCCCCTTCTCGATGC
ACACGGGCTGCAGCAAGGAGTTCAACCGGCAGGACAAGCTGAAAGCCCATATCCTCTCCCACGCTGGCCT
GAAGCTCCACAAGTGTGGGCTGTGCAGCAAGTCCTTCAGCCGTCGAGCTCACCTGGCAGAGCACCAACGA
GCCCACACAGGCAACTACAAGTTCCGCTGCGCGGGCTGCGCCAAGGGCTTCTCACGACACAAATACCTCA
AGGATCACCGCTGCCGCCTGGGCCCCACCAAGGACAAGGACCTGCAAGCCCGGCGGCCTCCCCGGAGGAG
GGCAACGGCGCGTGGTGGTGGCAGCATCGCCAGCGGGCACAAGGAGGAGAACCCCATGCCAGACCCGCTG
GGGCTGGAGGAGCTGAAGGCCGCAGGACCCTCGCCTGAGGCTGCCCCTGGCAAGCCACCCTTTGAGCAGG
ACGCTGTGTTGTCCATTGTGGTGGGCGGGGACCCGGAGCTGGTGGTGCCTGGGCACACAGAGGGTCTGGG
CTCCAACCTGGCACTTGCCGAGCTGCAGGCTGGAACCGAGGGAGGGTGTGCCATGCTCGCCGTCCCAGTC
TATATCCAAGCCTCAGAGTAA

Translation (846 aa):
MAQAIFEALEGMDNQTVLAVQSLLDGQGAVPDPTGQSVNAPPAIQPLDDEDVFLCGKCKKQFNSLPAFMT
HKREQCQANAPALATVSLATNSIYTPSAAPAAVQQAPPPANRQISTYITVPPSPLIQTLVQGNILVSDDV
LMSAMSAFTSLDQPMPPGPPPVQNSLNMHPVPNYLTQPPPPPPPPPPLPPPPQPPPPPPQTLGPSGRSNP
VGNSVVEVYNAAAPMAGNGTVEIQALGMQPYPPLEVPSQCVEAPVYPTPPVYSPGKQEFKPKGPSSTAPM
TNATGSTVATFDSPPTLKTRRAKGASGLPEAAGKPKAQKLKCSYCDKSFTKNFDLQQHIRSHTGEKPFQC
IACGRAFAQKSNVKKHMQTHKVWPPGRSGGTVSRNSVTVQVMALNPNRQEEEDTGLGQSLSSTTQPQALP
TAGEDEGDKPEAKQVVLIDSSYLCQFCPSKFSTYFQLKSHMIQHKKEQVYKCVVKSCAQMFPKLDTFLEH
IRSHQEELSYRCHLCSKDFPSLYDLGVHQYSHSLLPQHSPKKDSTVYKCVKCVNKYSTPEALEHHVQTAT
HSFPCPHCQKVFPCERYLRRHLPTHGSGGRFRCQICKKFFRKEHYLKLHAHIHSGEKPYKCSVCESAFNR
KDKLKRHMLIHEPFKKYKCPFSMHTGCSKEFNRQDKLKAHILSHAGLKLHKCGLCSKSFSRRAHLAEHQR
AHTGNYKFRCAGCAKGFSRHKYLKDHRCRLGPTKDKDLQARRPPRRRATARGGGSIASGHKEENPMPDPL
GLEELKAAGPSPEAAPGKPPFEQDAVLSIVVGGDPELVVPGHTEGLGSNLALAELQAGTEGGCAMLAVPV
YIQASE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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