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Report for CCDS35619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35619.1 Public Mus musculus 1 Stk36 23 108 98 CCDS HistoryNCBI Gene:269209Re-query CCDS DB by CCDS ID:35619.1Re-query CCDS DB by GeneID:269209See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35619.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087183.10 ENSMUSP00000084430.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087183.10Link to Ensembl Protein Viewer:ENSMUSP00000084430.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000087183Re-query CCDS DB by Protein ID:ENSMUSP00000084430
Original member NCBI NM_175031.3 NP_778196.2 Updated not alive Link to Nucleotide Sequence:NM_175031.3Link to Protein Sequence:NP_778196.2Re-query CCDS DB by Nucleotide ID:NM_175031Re-query CCDS DB by Protein ID:NP_778196
Current member NCBI NM_175031.4 NP_778196.2 Accepted alive Link to Nucleotide Sequence:NM_175031.4Link to Protein Sequence:NP_778196.2Re-query CCDS DB by Nucleotide ID:NM_175031Re-query CCDS DB by Protein ID:NP_778196Link to BLAST:NP_778196.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_778196.2 1316 Q69ZM6-1 1316 100% 0 0

Chromosomal Locations for CCDS 35619.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 74602118 74602201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74603138 74603278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74603397 74603474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74605389 74605519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74609012 74609261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74610772 74610865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74611089 74611258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74611401 74611588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74612686 74612785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74616576 74616719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74622196 74622375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74623285 74623382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74623830 74623935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74625493 74625643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74626013 74626140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74626543 74626647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74627395 74627493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74627585 74627673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74627918 74627981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74628142 74628252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74631586 74631666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74632729 74632900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74633142 74633289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74633507 74633654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74634010 74634756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74635715 74635858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3951 nt):
ATGGAAAAGTACCACGTTTTGGAGATGATTGGAGAAGGCTCTTTTGGGAGAGTGTATAAGGGCCGAAAAA
AATACAGTGCTCAGGTGGTGGCCTTGAAGTTCATCCCCAAACTGGGGCGCTCAGAGAAAGAGCTGAGGAA
TCTGCAACGAGAGATTGAAATCATGCGGGGTCTGTGGCATCCCAACATTGTGCATATGCTCGACAGCTTT
GAGACTGACAAAGAGGTGGTGGTGGTGACAGACTACGCTGAAGGAGAACTCTTTCAGATTCTGGAAGATG
ATGGAAAACTTCCTGAAGACCAGGTTCAGGCCATCGCTGCCCAGTTGGTGTCAGCTCTGTACTACCTGCA
TTCCCACCGCATCCTACACCGCGACATGAAACCGCAGAACATTCTTCTCGCCAAGGGTGGTGGCATTAAA
CTTTGTGACTTTGGATTCGCCCGAGCTATGAGCACCAACACCATGGTGCTGACGTCGATCAAAGGCACAC
CGCTCTATATGTCTCCAGAGCTGGTGGAGGAGCGACCATATGACCACACCGCAGACCTCTGGTCTGTGGG
CTGCATCCTGTATGAGCTGGCTGTCGGCACGCCTCCCTTCTACACCACCAGCATCTTTCAGCTGGTTAGC
CTCATTCTCAAGGACCCTGTGCGCTGGCCCTCCACCATTAGTTCCTGCTTCAAGAACTTCTTGCAGGGGC
TGCTCACCAAGGACCCCCGGCAGCGTCTGTCCTGGCCAGACCTCTTACATCACCCCTTTATTGCCGGCCG
TGTCACCATCATAACTGAACCAGCAGGCTCCGATTTGGGCACCCCATTTACTAGTCGCCTACCCCCAGAA
CTTCAGGTCCTCAAGGATGAACAGGCGCATCGGCTCGCACCCAAGGGTAACCAGTCTCGCATCCTGCGCC
AGGCCTGTAAACTCATGGCTGAAGAAGCCAAGCAGAAGGAAGACCAAAATGCAGGATCTGCCCTTGAACA
AGAAGACGGGCTCTGCAAGGTGACACCCAGCACAGCCCCCGTGCCTGGACTAAAGGCCACTCCTCAGGAG
TCAAGCCTCTTGGCTGGTATACTGGCTTCAGAAATGAAGAACAACTGGGAAGACTGGGGGGCTGGAGAAG
CACCCCGTACCTCTCGGGAAAACCACATCAACCTGGAGTGTGAACAAGGCTTCCCAGAGCCGAGGCCAGA
GGCGATGGGCCGGCAGAGCACTGATGTAGTGGATCCTGAAAATGAGGAGCCAGACAGTGATGATGAGTGG
CAACGCCTACTAGAGACCAGCGAGCCTGGGCCTGTGCAGCTGAAGTCCCCCCTCACCCTGTTGTGTAACC
CTGACTTCTGCCAGCGCATCCAGAGTCAGCTGCGCGGGACTGGCGAGCAGATCCTGAAAGGCGTTCTGGA
TGGTGTGTCCCACCTCCTTCCTGTACTCCGCATCCTGAGTAGTCTCCTATCCAGCTGCAATGACTCTGTG
CTCTTGTATTCCTTCTGCCAGGAGGCAGGACTGCCTGAGCTGCCTCTCAGCCTTCTTAGGTACAGCCAGG
AGAGTAGCAGCATCCAGCAGCAACCTTGGTATGGGGCGCTCTTACGGGACCTGGTGGCTGTGGTTCAGGC
CTACTTTTCGTGCACCTTCAATCTGGAGAGGAGCCAGACAGGTGACAGCCTACAGGTGTTTCAGGAGGCC
GCCAGCCTCTTTTTGGACCTGTTGGGGAAGCTGCTGGCCCAATCAGATGATTCCGAGCAGACATTTCGAA
GGGATAGCCTTATGTGCTTTGCTGTCTTGTGTGAAGCTGTGGACGGAAACAGCTGGGCCGTCTCCAAAGC
CTTCTACTCCAGCCTGTTGACCACACAGCGCGCTGTGTTGGATGGCCTCCTTCACGGCCTGACAGTCCCA
CAGCTTCCTTTCCACACACCACCAGGAGCCCCACAAGTGAGCCAGCCGCTGCGGGAGCAGAGTGAAGATG
TACCTGGAGCCATCTCTTCTGCCCTGGCAGCCATGTGTACTGCTCCTGTGGGGCTGCCCAGCTGTTGGGA
TGCCAAGGAGCAGGTCTCTTGGCATTTGGCCAACCAGCTAACTGAAGACAGCAGCCAACTGAGGCCATCC
CTCATCTCTGGTCTGCGACACCATGTCCTGTGCCTCCACCTTCTCAAGGTTCTCTACGCCTGCTGCTATA
TTAGTGAGCGCCTGTGCCATATTCTGGGGCAAGAGCCCCTGGCCTTGGAGTCGCTGCTGATGTTAGTCCA
GGGCAAGGTGAAAGTAGCAGATTGGGAAGAGTCCACTGAGGTGGCACTTTACCTCCTGTCCCTTCTTGTC
TTTCGGCTCCAAGATCTGCCTTCAGGGATGGAGAAGCTGGGCAGTGAGGTTGCTACTCTCTTTACCCACT
CACATGTCGTCTCTCTTGTGAATGCGGCAGCCTGTCTCTTAGGACAGCTTGGTCAGCAAGGGGTGACCTT
TGACCTCCAGCCCCGGGAATGGATTGCTGCAGCTGCACATGCCTTGTCTGCCCCTGCAGAGGTCCGGCTG
ACTCCGCCGTATAGTTGTGGCTTCTATGATGGCCTCCTCATTCTCCTGCTTCAGCTTCTTATGCAGGTAC
AGGGGAAGCCTGGCCTGATCAGGGATGTGGTTGGTTCAGAGGTGTGGACCATTCTGTGGCACCGCTTTTC
CATGGCCCTGAGGCTGCCCGAGGAGGTGTCTGCCCAGGAAGACGACCTGCTACTATCAAGTCCCTCCAGC
CTAGAGCCAGACTGGACACTGATTTCACCCCAAGGCATGGCAGCCTTGCTGAGCCTGGCCATGGCCATCT
TCACCCAGGAGTCCCAGTTATGCCTGAGCCACCTGTCCCAGCATGGCAGTGTCCTCATGCTGACCCTGAA
GCACCTGCTTTCACCCAGCTTCTTGCACCACCTGAGCCAGGCGCCGCAGGGGCCCGAGTTTCTCCCCGTT
GTGGTGCTCTCCGTGTGCAAGCTGCTCTGCTTCCCTTTTGCCCTGGATGTGGATGCTGACCTCCTTGTAG
GTGTCTTGGCTGACCTCAGGGCCTCGGAAGTGGTAGTCTGCCTGCTGCAGGTCTGCTGCCACCACCTTTC
GTTGTTACAAGCAGAGCTGCCCATTGGCCTCCTTACACGCCTGGCCCTCACGGATTCTGCCTCTCTCAAG
CAGTTTGTGAACACAGTGGCCACCTCTTCTAGAGCCATCATCTCATTCCTCTCTGTTGTTCTCCTGAGTG
ACCAGCCCCTCATGATCTCTGACCTCCTGTCCCTGCTGACACACACAGCCCGGATTCTGTCCCCCAGCCA
CTTGTCCTTTATCCAAGAGCTCCTGTCTGGCTCTGATGAATCCTATCGGCCATTGCGCAGCCTCCTAGGC
CACTCAGAGAACACTGTGCGGGTCCGTGCATATGGGCTCCTGGGACATTTATTACAGCACAGCATGGCCC
TACGTGGGGCACTACAGAGTCAGTCAGGACTGCTCAACCTTCTGCTGCTAGGGCTTGGAGACAAGGACCC
TGCCGTGCGACGCAGTGCCAGCTTTGCTGTGGGCAATGCAGCCTACCAGGCTGGGCCTTTGGGACCTGCC
TTGGCAGCTGCAGTGCCCAGTATGACCCAGCTGCTTGGAGATGCTCAGGATGGGATCCGGCGCAATGCTG
CATCAGCTCTAGGCAATCTGGGACCTGAAGGATTGGGCAAGGAGCTATTAAAGTGCCAAGTACCCCAGCG
GCTCCTAGAAATGGCATGTGGAGACCCTCAGCCAACTGTCAAAGAGGCTGCCCTCATTGCCCTTCGAAGC
CTCCAACAGGAGTCCTGTATTCATCAGGTGCTGGTGTCGCTGGGTGCCAGTGAGAAGTTAGCCTTGCTCT
CTTTGGGGAATCAGTTACTGCCGAATAGCAGCAACAGGCCTGCCTCCGTCAGACACTGCAGGAAGCTCAT
CCAACTCCTGAGGCCAACCCACAGCACATGA

Translation (1316 aa):
MEKYHVLEMIGEGSFGRVYKGRKKYSAQVVALKFIPKLGRSEKELRNLQREIEIMRGLWHPNIVHMLDSF
ETDKEVVVVTDYAEGELFQILEDDGKLPEDQVQAIAAQLVSALYYLHSHRILHRDMKPQNILLAKGGGIK
LCDFGFARAMSTNTMVLTSIKGTPLYMSPELVEERPYDHTADLWSVGCILYELAVGTPPFYTTSIFQLVS
LILKDPVRWPSTISSCFKNFLQGLLTKDPRQRLSWPDLLHHPFIAGRVTIITEPAGSDLGTPFTSRLPPE
LQVLKDEQAHRLAPKGNQSRILRQACKLMAEEAKQKEDQNAGSALEQEDGLCKVTPSTAPVPGLKATPQE
SSLLAGILASEMKNNWEDWGAGEAPRTSRENHINLECEQGFPEPRPEAMGRQSTDVVDPENEEPDSDDEW
QRLLETSEPGPVQLKSPLTLLCNPDFCQRIQSQLRGTGEQILKGVLDGVSHLLPVLRILSSLLSSCNDSV
LLYSFCQEAGLPELPLSLLRYSQESSSIQQQPWYGALLRDLVAVVQAYFSCTFNLERSQTGDSLQVFQEA
ASLFLDLLGKLLAQSDDSEQTFRRDSLMCFAVLCEAVDGNSWAVSKAFYSSLLTTQRAVLDGLLHGLTVP
QLPFHTPPGAPQVSQPLREQSEDVPGAISSALAAMCTAPVGLPSCWDAKEQVSWHLANQLTEDSSQLRPS
LISGLRHHVLCLHLLKVLYACCYISERLCHILGQEPLALESLLMLVQGKVKVADWEESTEVALYLLSLLV
FRLQDLPSGMEKLGSEVATLFTHSHVVSLVNAAACLLGQLGQQGVTFDLQPREWIAAAAHALSAPAEVRL
TPPYSCGFYDGLLILLLQLLMQVQGKPGLIRDVVGSEVWTILWHRFSMALRLPEEVSAQEDDLLLSSPSS
LEPDWTLISPQGMAALLSLAMAIFTQESQLCLSHLSQHGSVLMLTLKHLLSPSFLHHLSQAPQGPEFLPV
VVLSVCKLLCFPFALDVDADLLVGVLADLRASEVVVCLLQVCCHHLSLLQAELPIGLLTRLALTDSASLK
QFVNTVATSSRAIISFLSVVLLSDQPLMISDLLSLLTHTARILSPSHLSFIQELLSGSDESYRPLRSLLG
HSENTVRVRAYGLLGHLLQHSMALRGALQSQSGLLNLLLLGLGDKDPAVRRSASFAVGNAAYQAGPLGPA
LAAAVPSMTQLLGDAQDGIRRNAASALGNLGPEGLGKELLKCQVPQRLLEMACGDPQPTVKEAALIALRS
LQQESCIHQVLVSLGASEKLALLSLGNQLLPNSSNRPASVRHCRKLIQLLRPTHST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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