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Report for CCDS79330.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79330.1 Public Mus musculus 14 Spryd7 23 108 98 CCDS HistoryNCBI Gene:66674Re-query CCDS DB by CCDS ID:79330.1Re-query CCDS DB by GeneID:66674See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79330.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100496.4 ENSMUSP00000098065.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100496.4Link to Ensembl Protein Viewer:ENSMUSP00000098065.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100496Re-query CCDS DB by Protein ID:ENSMUSP00000098065
Original member Current member NCBI NM_001310603.1 NP_001297532.1 Accepted alive Link to Nucleotide Sequence:NM_001310603.1Link to Protein Sequence:NP_001297532.1Re-query CCDS DB by Nucleotide ID:NM_001310603Re-query CCDS DB by Protein ID:NP_001297532Link to BLAST:NP_001297532.1

Chromosomal Locations for CCDS 79330.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 61535140 61535241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61545682 61545848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61549744 61549860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61556521 61556626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGGCCGCGTCGGCGTGGTGCTGCCTGCGCTGCTGCAGGGACGGCGGGACTGGCCACATTCCTCTCAAGG
AGATGCCGGCCGTACAGTTGGACACGCAGCACATGGGAACAGATGTTGTCATCGTGAAAAACGGAAGAAG
AATCTGTGGCACTGGAGGTTGTTTAGCCAGTGCACCCTTACATCAGAACAAAAGCTACTTTGAGTTCAAA
ATCCAGTCTACTGGAATCTGGGGTATAGGTGTTGCAACTCAGAAAGTTAACTTGAACCAGATTCCTCTTG
GCCGAGACATGCATAGCCTGGTGATGAGAAATGACGGAGCCTTGTACCACAACAACGAAGAGAAAAACAG
GCTGCCAGCAAACAGCCTTCCTCAGGAGGGAGATGTAGTGTTGACGACAGTGCAATTCTGGATTGCCAGT
TCAGTGAATTTTATCATACTCCTCCACCTGGTTTTGAAAAAATACTATTCGAGCAGCAGATCTTCTGAAT
GA

Translation (163 aa):
MAASAWCCLRCCRDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNGRRICGTGGCLASAPLHQNKSYFEFK
IQSTGIWGIGVATQKVNLNQIPLGRDMHSLVMRNDGALYHNNEEKNRLPANSLPQEGDVVLTTVQFWIAS
SVNFIILLHLVLKKYYSSSRSSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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