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Report for CCDS48380.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
48380.1 |
Public |
Mus musculus |
1 |
Cacna1s |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 48380.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000112068.9 |
ENSMUSP00000107699.3 |
Accepted |
alive |
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NCBI |
NM_014193.3 |
NP_055008.2 |
Updated |
not alive |
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NCBI |
NM_014193.4 |
NP_055008.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_055008.2 |
1831 |
Q02789-3 |
1831 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 48380.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5496 nt): ATGGAGCCGCCCTCACCCCAGGACGAGGGCCTGAGGAAGAAGCAGCCGAAGAAACCTGTTCCTGAGATTC TGCCGAGGCCCCCGCGGGCCTTGTTCTGCCTGACTCTACAGAACCCCCTGAGGAAGGCCTGCATCAGCAT CGTGGAATGGAAACCCTTCGAGACCATCATCTTGCTCACCATCTTTGCCAACTGTGTGGCCCTGGCAGTG TACCTGCCCATGCCAGAGGATGACAACAACACTCTGAACCTCGGCCTGGAGAAACTGGAGTACTTCTTCC TCATTGTCTTCTCCATTGAAGCCGCCATGAAGATCATAGCCTACGGCTTCCTATTCCATCAGGATGCATA CCTGCGCAGTGGCTGGAACGTTCTGGACTTCATCATTGTCTTTCTGGGGGTCTTCACTGTGATTCTGGAA CAAGTTAACATCATTCAAACCAACACGGCCCCCATGAGCAGCAAAGGAGCCGGCTTGGATGTGAAGGCCC TTCGAGCATTCCGCGTGCTCAGACCCCTGCGGCTGGTGTCGGGGGTGCCCAGTCTTCAGGTGGTCCTCAA CTCCATCTTCAAGGCCATGCTCCCCCTGTTCCACATTGCCCTGCTCGTCCTCTTCATGGTCATCATCTAC GCCATCATTGGGCTGGAGCTCTTCAAAGGCAAGATGCACAAGACTTGCTACTTCATTGGGACAGACATTG TAGCCACAGTTGAGAATGAGAAACCATCACCCTGTGCTAGAACTGGCTCTGGGCGTCCCTGCACCATCAA TGGCAGCGAGTGCCGAGGAGGTTGGCCAGGACCCAACCACGGCATCACCCACTTCGACAACTTTGGCTTC TCTATGCTCACTGTGTATCAATGCATCTCCATGGAGGGGTGGACTGATGTCCTGTACTGGGTCAACGATG CCATCGGGAATGAGTGGCCCTGGATCTACTTTGTCACCCTCATTCTGCTGGGCTCCTTCTTCATCCTCAA CCTGGTGCTGGGTGTCCTGAGTGGAGAATTCACCAAAGAGCGAGAGAAGGCCAAGTCCAGGGGAACCTTC CAAAAGCTCCGAGAGAAACAGCAGCTGGAGGAGGACCTCCGTGGTTACATGAGCTGGATCACACAGGGCG AGGTCATGGACGTGGACGACTTGAGAGAAGGCAAGCTGTCTTTGGATGAAGGGGGATCAGACACAGAGAG CTTGTATGAAATCGAAGGCTTGAACAAAATCATCCAGTTCATTCGGCACTGGCGACAGTGGAATCGCGTC TTCCGCTGGAAGTGCCATGACCTAGTGAAATCCAAGGTCTTCTATTGGCTGGTGATCCTGATCGTTGCCC TAAACACCCTGTCCATTGCCTCGGAGCACCACAACCAGCCACTCTGGTTGACCCATTTGCAAGATGTTGC CAACCGCGTGTTGCTGACCCTCTTCACCATCGAAATGCTCATGAAGATGTACGGGCTGGGCCTGCGCCAG TACTTCATGTCCATCTTCAACCGCTTCGACTGCTTCGTGGTGTGCAGCGGCATCCTGGAGATCCTGCTGG TGGAGTCGGGAGCCATGTCGCCCCTGGGCATCTCTGTGCTCCGCTGTATCCGCCTCCTGAGGCTCTTCAA GATCACCAAGTACTGGACATCGCTGAGCAACCTGGTGGCCTCACTGCTCAACTCCATCCGCTCCATTGCT TCCCTCTTGCTGCTGCTCTTTCTCTTCATCATCATCTTTGCCCTGCTGGGCATGCAGCTCTTTGGAGGCA GATATGACTTTGAAGACACAGAAGTACGACGAAGCAACTTTGACAACTTCCCCCAGGCCCTCATCAGTGT CTTCCAGGTCCTGACGGGTGAAGACTGGAACTCTGTGATGTACAATGGGATCATGGCTTACGGAGGTCCG ACCTACCCTGGTGTGCTGGTGTGCATTTATTTCATCATCCTTTTCGTCTGTGGCAACTACATCCTTCTCA ACGTCTTCCTGGCTATTGCTGTGGACAACCTGGCAGAGGCAGAGAGTCTGACATCTGCCCAAAAGGCCAA GGCTGAGGAGAGAAAGCGCAGGAAGATGTCGAAAGGGCTCCCAGACAAGTCAGAAGAGGAGAGGGCCACG GTGACCAAGAAACTGGAGCAGAAGTCCAAGGGTGAAGGCATCCCCACCACCGCCAAGCTGAAAATCGATG AGTTTGAATCAAACGTTAATGAGGTGAAAGACCCCTACCCTTCGGCTGACTTCCCAGGGGACGATGAGGA AGATGAGCCCGAGATCCCAGTGAGCCCCCGACCACGCCCTCTGGCCGAGCTGCAGCTGAAAGAGAAAGCA GTGCCCATCCCGGAGGCTAGCTCCTTCTTCATCTTCAGTCCCACCAACAAGATCCGTGTCCTGTGTCACC GCATTGTCAATGCCACCTGGTTCACCAACTTCATCCTGCTCTTCATCCTGCTCAGCAGTGCCGCCCTGGC CGCTGAGGATCCCATCCGGGCCGACTCCATGAGGAATCAGATCCTCGAGTATTTTGATTATGTGTTCACT GCTGTTTTCACGGTGGAGATTGTCCTTAAGATGACCACCTATGGAGCCTTCCTGCACAAAGGCTCCTTCT GCCGCAACTACTTCAACATCCTGGACCTGCTGGTGGTGGCTGTGTCCCTCATCTCCATGGGCCTCGAGTC CAGCGCCATCTCCGTGGTGAAGATCTTAAGGGTTCTGAGAGTGCTGAGACCACTCCGGGCCATAAACAGA GCCAAAGGGTTGAAGCACGTGGTGCAGTGCGTGTTTGTTGCCATTCGCACCATCGGGAACATCGTGCTGG TCACCACGCTCCTGCAGTTCATGTTTGCGTGCATTGGAGTGCAGCTTTTCAAGGGAAAGTTCTACAGCTG CAATGACTTATCCAAGATGACTGAAGAGGAATGCAGGGGCTACTACTACATATACAAGGATGGAGACCCC ACTCAGATAGAGCTGCGTCCCCGCCAGTGGATACACAATGACTTCCACTTTGACAATGTACTCTCCGCTA TGATGTCACTCTTCACGGTCTCCACCTTCGAGGGTTGGCCTCAGCTACTGTACAAGGCCATAGACTCAAA TGAGGAGGACACCGGCCCTGTCTACAACAACCGAGTGGAGATGGCCATCTTCTTCATTATCTACATCATC CTCATTGCCTTCTTCATGATGAACATCTTTGTGGGCTTTGTCATCGTTACCTTCCAGGAACAGGGAGAGA CTGAGTATAAGAACTGTGAGCTCGACAAGAACCAGCGCCAATGCGTACAGTATGCCCTGAAGGCCCGCCC ACTGAGGTGTTACATCCCCAAAAACCCATACCAGTATCAGGTGTGGTATGTCGTCACTTCCTCCTACTTT GAATACCTGATGTTTGCTCTCATCATGCTCAATACTATCTGCCTGGGCATGCAGCATTACAACCAGTCGG AACAGATGAACCACATCTCAGACATTCTCAACGTGGCTTTCACCATCATCTTCACCCTGGAGATGGTCCT CAAGCTCATAGCTTTCAAGCCCAGGGGCTATTTTGGAGATCCTTGGAATGTGTTTGACTTCCTAATCGTC ATCGGCAGCATCATTGACGTCATCCTGAGCGAGATCGATGACCCAGATGAGAGCGCCCGTATCTCCAGTG CCTTCTTCCGCCTGTTCCGGGTCATGAGACTGGTCAAGCTGCTGAACCGGGCGGAGGGTGTGCGCACCCT GCTGTGGACATTCATCAAGTCCTTCCAGGCCCTGCCGTACGTGGCTTTGCTGATCGTGATGCTCTTCTTC ATCTACGCGGTCATCGGCATGCAGATGTTCGGGAAGATCGCCATGGTGGACGGGACGCAGATAAACCGGA ACAACAACTTCCAGACTTTCCCACAGGCCGTGCTGCTGCTCTTCAGGTGTGCCACAGGGGAAGCCTGGCA AGAGATCCTGCTGGCCTGCAGCTATGGGAAGCTGTGTGACCCGGAGTCTGACTACGCACCCGGGGAGGAG CATACATGCGGCACCAACTTCGCCTACTACTACTTCATCAGTTTCTACATGCTCTGCGCCTTCCTGATCA TCAACCTCTTTGTGGCTGTCATCATGGACAACTTTGATTACCTCACAAGGGACTGGTCCATTCTGGGCCC TCACCACCTGGACGAGTTCAAGGCCATTTGGGCTGAGTACGACCCGGAGGCTAAGGGCAGGATCAAGCAC CTGGATGTGGTGACCCTGCTGAGGAGGATTCAGCCCCCTCTGGGCTTTGGGAAGTTCTGCCCACACAGGG TAGCATGTAAGAGGCTGGTGGGCATGAACATGCCCCTGAACAGCGATGGCACAGTCACCTTTAATGCCAC ACTATTTGCCCTGGTGCGCACAGCCCTCAAGATCAAGACAGAAGGCAACTTTGAACAAGCTAACGAGGAG CTGAGAGCCATCATCAAGAAGATCTGGAAGAGAACCAGCATGAAGCTCTTGGACCAAGTCATCCCTCCAA TAGGAGATGATGAGGTGACAGTAGGGAAATTCTATGCCACATTCCTCATCCAGGAGCACTTCCGGAAGTT CATGAAGCGCCAGGAGGAATATTATGGGTATCGACCCAAAAAGGACACAGTTCAGATACAGGCTGGATTA CGGACCATAGAGGAAGAGGCAGCTCCTGAGATCCACCGTGCCATCTCTGGAGACCTGACAGCAGAGGAGG AACTGGAGAGGGCCATGGTAGAGGCTGCCATGGAGGAGGGGATATTCCGGAGGACGGGAGGCCTGTTTGG TCAAGTGGACAACTTCCTGGAAAGGACCAACTCTCTGCCCCCTGTCATGGCCAACCAAAGACCCCTCCAA TTTGCTGAAATAGAGATGGAAGAGCTGGAGTCACCAGTCTTCTTGGAGGACTTCCCTCAGAACCCAGGCA CCCACCCTCTTGCTCGTGCCAATACCAACAACGCCAATGCCAATGTTGCCTATGGCAACAGCAGCCATAG AAACAACCCAGTGTTTTCCAGCATCTGCTATGAACGGGAGTTCTTGGGAGAGGCGGACATGCCTGTTACC AGAGAAGGACCCCTCAGTCAGCCCTGCAGGGCCTCAGGACCTCACAGCAGATCTCATGTGGACAAACTGA AAAGACCGATGACCCAGAGAGGAATGCCTGAAGGCCAGGTGCCTCCTTCCCCGTGCCAGCTCTCCCAGGC AGAGCATCCTGTGCAGAAAGAGGGAAAGGGCCCCACGTCACGGTTTCTGGAAACACCCAACAGCAGGAAC TTTGAGGAGCACGTTCCCAGGAATTCGGCTCACAGGTGCACGGCTCCAGCTACTGCCATGCTGATCCAGG AGGCTCTGGTTCGAGGAGGACTAGACTCCTTAGCAGCAGATGCTAACTTCGTCATGGCAACAGGCCAGGC CCTGGCAGATGCCTGCCAGATGGAACCAGAGGAAGTCGAGGTGGCAGCAACAGAGCTACTGAAGCAAGAA TCCCCAGAGGGCGGGGCCGTGCCCTGGGAGCCTTGA
Translation (1831 aa): MEPPSPQDEGLRKKQPKKPVPEILPRPPRALFCLTLQNPLRKACISIVEWKPFETIILLTIFANCVALAV YLPMPEDDNNTLNLGLEKLEYFFLIVFSIEAAMKIIAYGFLFHQDAYLRSGWNVLDFIIVFLGVFTVILE QVNIIQTNTAPMSSKGAGLDVKALRAFRVLRPLRLVSGVPSLQVVLNSIFKAMLPLFHIALLVLFMVIIY AIIGLELFKGKMHKTCYFIGTDIVATVENEKPSPCARTGSGRPCTINGSECRGGWPGPNHGITHFDNFGF SMLTVYQCISMEGWTDVLYWVNDAIGNEWPWIYFVTLILLGSFFILNLVLGVLSGEFTKEREKAKSRGTF QKLREKQQLEEDLRGYMSWITQGEVMDVDDLREGKLSLDEGGSDTESLYEIEGLNKIIQFIRHWRQWNRV FRWKCHDLVKSKVFYWLVILIVALNTLSIASEHHNQPLWLTHLQDVANRVLLTLFTIEMLMKMYGLGLRQ YFMSIFNRFDCFVVCSGILEILLVESGAMSPLGISVLRCIRLLRLFKITKYWTSLSNLVASLLNSIRSIA SLLLLLFLFIIIFALLGMQLFGGRYDFEDTEVRRSNFDNFPQALISVFQVLTGEDWNSVMYNGIMAYGGP TYPGVLVCIYFIILFVCGNYILLNVFLAIAVDNLAEAESLTSAQKAKAEERKRRKMSKGLPDKSEEERAT VTKKLEQKSKGEGIPTTAKLKIDEFESNVNEVKDPYPSADFPGDDEEDEPEIPVSPRPRPLAELQLKEKA VPIPEASSFFIFSPTNKIRVLCHRIVNATWFTNFILLFILLSSAALAAEDPIRADSMRNQILEYFDYVFT AVFTVEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVAVSLISMGLESSAISVVKILRVLRVLRPLRAINR AKGLKHVVQCVFVAIRTIGNIVLVTTLLQFMFACIGVQLFKGKFYSCNDLSKMTEEECRGYYYIYKDGDP TQIELRPRQWIHNDFHFDNVLSAMMSLFTVSTFEGWPQLLYKAIDSNEEDTGPVYNNRVEMAIFFIIYII LIAFFMMNIFVGFVIVTFQEQGETEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYVVTSSYF EYLMFALIMLNTICLGMQHYNQSEQMNHISDILNVAFTIIFTLEMVLKLIAFKPRGYFGDPWNVFDFLIV IGSIIDVILSEIDDPDESARISSAFFRLFRVMRLVKLLNRAEGVRTLLWTFIKSFQALPYVALLIVMLFF IYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEILLACSYGKLCDPESDYAPGEE HTCGTNFAYYYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKAIWAEYDPEAKGRIKH LDVVTLLRRIQPPLGFGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEE LRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKDTVQIQAGL RTIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIFRRTGGLFGQVDNFLERTNSLPPVMANQRPLQ FAEIEMEELESPVFLEDFPQNPGTHPLARANTNNANANVAYGNSSHRNNPVFSSICYEREFLGEADMPVT REGPLSQPCRASGPHSRSHVDKLKRPMTQRGMPEGQVPPSPCQLSQAEHPVQKEGKGPTSRFLETPNSRN FEEHVPRNSAHRCTAPATAMLIQEALVRGGLDSLAADANFVMATGQALADACQMEPEEVEVAATELLKQE SPEGGAVPWEP
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