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Report for CCDS14949.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14949.1 Public Mus musculus 1 1700019D03Rik 23 108 98 CCDS HistoryNCBI Gene:67080Re-query CCDS DB by CCDS ID:14949.1Re-query CCDS DB by GeneID:67080See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14949.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050567.10 ENSMUSP00000055413.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050567.10Link to Ensembl Protein Viewer:ENSMUSP00000055413.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000050567Re-query CCDS DB by Protein ID:ENSMUSP00000055413
Original member Current member EBI ENSMUST00000114492.7 ENSMUSP00000110136.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114492.7Link to Ensembl Protein Viewer:ENSMUSP00000110136.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114492Re-query CCDS DB by Protein ID:ENSMUSP00000110136
Original member Current member EBI ENSMUST00000114493.1 ENSMUSP00000110137.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114493.1Link to Ensembl Protein Viewer:ENSMUSP00000110137.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114493Re-query CCDS DB by Protein ID:ENSMUSP00000110137
Original member Current member EBI ENSMUST00000191441.1 ENSMUSP00000139750.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000191441.1Link to Ensembl Protein Viewer:ENSMUSP00000139750.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000191441Re-query CCDS DB by Protein ID:ENSMUSP00000139750
Original member Current member EBI ENSMUST00000190831.6 ENSMUSP00000140160.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000190831.6Link to Ensembl Protein Viewer:ENSMUSP00000140160.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000190831Re-query CCDS DB by Protein ID:ENSMUSP00000140160
Original member Current member EBI ENSMUST00000186266.1 ENSMUSP00000140273.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000186266.1Link to Ensembl Protein Viewer:ENSMUSP00000140273.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000186266Re-query CCDS DB by Protein ID:ENSMUSP00000140273
Original member Current member EBI ENSMUST00000190726.1 ENSMUSP00000140530.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000190726.1Link to Ensembl Protein Viewer:ENSMUSP00000140530.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000190726Re-query CCDS DB by Protein ID:ENSMUSP00000140530
Original member Current member NCBI NM_001368274.1 NP_001355203.1 Accepted alive Link to Nucleotide Sequence:NM_001368274.1Link to Protein Sequence:NP_001355203.1Re-query CCDS DB by Nucleotide ID:NM_001368274Re-query CCDS DB by Protein ID:NP_001355203Link to BLAST:NP_001355203.1
Original member Current member NCBI NM_001368276.1 NP_001355205.1 Accepted alive Link to Nucleotide Sequence:NM_001368276.1Link to Protein Sequence:NP_001355205.1Re-query CCDS DB by Nucleotide ID:NM_001368276Re-query CCDS DB by Protein ID:NP_001355205Link to BLAST:NP_001355205.1
Original member Current member NCBI NM_001368277.1 NP_001355206.1 Accepted alive Link to Nucleotide Sequence:NM_001368277.1Link to Protein Sequence:NP_001355206.1Re-query CCDS DB by Nucleotide ID:NM_001368277Re-query CCDS DB by Protein ID:NP_001355206Link to BLAST:NP_001355206.1
Original member Current member NCBI NM_001368278.1 NP_001355207.1 Accepted alive Link to Nucleotide Sequence:NM_001368278.1Link to Protein Sequence:NP_001355207.1Re-query CCDS DB by Nucleotide ID:NM_001368278Re-query CCDS DB by Protein ID:NP_001355207Link to BLAST:NP_001355207.1
Original member Current member NCBI NM_001368279.1 NP_001355208.1 Accepted alive Link to Nucleotide Sequence:NM_001368279.1Link to Protein Sequence:NP_001355208.1Re-query CCDS DB by Nucleotide ID:NM_001368279Re-query CCDS DB by Protein ID:NP_001355208Link to BLAST:NP_001355208.1
Original member Current member NCBI NM_001368280.1 NP_001355209.1 Accepted alive Link to Nucleotide Sequence:NM_001368280.1Link to Protein Sequence:NP_001355209.1Re-query CCDS DB by Nucleotide ID:NM_001368280Re-query CCDS DB by Protein ID:NP_001355209Link to BLAST:NP_001355209.1
Original member Current member NCBI NM_001368281.1 NP_001355210.1 Accepted alive Link to Nucleotide Sequence:NM_001368281.1Link to Protein Sequence:NP_001355210.1Re-query CCDS DB by Nucleotide ID:NM_001368281Re-query CCDS DB by Protein ID:NP_001355210Link to BLAST:NP_001355210.1
Original member Current member NCBI NM_144953.3 NP_659202.1 Accepted alive Link to Nucleotide Sequence:NM_144953.3Link to Protein Sequence:NP_659202.1Re-query CCDS DB by Nucleotide ID:NM_144953Re-query CCDS DB by Protein ID:NP_659202Link to BLAST:NP_659202.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355203.1 106 Q9CPS8 106 100% 0 0
NP_001355205.1 106 Q9CPS8 106 100% 0 0
NP_001355206.1 106 Q9CPS8 106 100% 0 0
NP_001355207.1 106 Q9CPS8 106 100% 0 0
NP_001355208.1 106 Q9CPS8 106 100% 0 0
NP_001355209.1 106 Q9CPS8 106 100% 0 0
NP_001355210.1 106 Q9CPS8 106 100% 0 0
NP_659202.1 106 Q9CPS8 106 100% 0 0

Chromosomal Locations for CCDS 14949.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 52925247 52925567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (321 nt):
ATGGGCTGCATGAAGTCAAAGGAAACGTTCCCATTTCCTACCACATTGGACATTGACAAGCTGCATGAGA
GTGAGGAGGCCTTTATTCCAGATGACAGCAGTCAATATAGGACACCTTCTCCAGGTGAACAACAGCAAGT
CCAGGAAGTAAAGAAACTCCCAGAGCCCGGTGCTGTGATCGGTGCCCTGATCCTTGAATTCGCAGACCGT
CTGGCCAGTGAAATTGTGGAGGATGCCTTGCAGCAGTGGGCATGTGAAAACATCCAGTACTACAACATCC
CATACATCGAGAGTGAGGGCTCAGACACCACCATTAATTGA

Translation (106 aa):
MGCMKSKETFPFPTTLDIDKLHESEEAFIPDDSSQYRTPSPGEQQQVQEVKKLPEPGAVIGALILEFADR
LASEIVEDALQQWACENIQYYNIPYIESEGSDTTIN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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