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Report for CCDS39937.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39937.1 Public Mus musculus 7 Klk9 23 108 98 CCDS HistoryNCBI Gene:101533Re-query CCDS DB by CCDS ID:39937.1Re-query CCDS DB by GeneID:101533See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39937.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005891.6 ENSMUSP00000005891.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005891.6Link to Ensembl Protein Viewer:ENSMUSP00000005891.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000005891Re-query CCDS DB by Protein ID:ENSMUSP00000005891
Original member Current member NCBI NM_028660.3 NP_082936.2 Accepted alive Link to Nucleotide Sequence:NM_028660.3Link to Protein Sequence:NP_082936.2Re-query CCDS DB by Nucleotide ID:NM_028660Re-query CCDS DB by Protein ID:NP_082936Link to BLAST:NP_082936.2

Chromosomal Locations for CCDS 39937.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43791997 43792039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43792179 43792335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43794264 43794529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43795552 43795688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43795991 43796143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (756 nt):
ATGAAGCTGGGACTCACCTTGGTGCTGTTCTCTCTGCTGGCAGGCCACTGTGGAGCTGACACCCGTGCCG
TCGGAGCCCGGGAATGCGTACGCAACTCTCAGCCCTGGCAGGCTGGCCTCTTCTACCTCACCCGGCAGCT
CTGTGGAGCCACGCTCATCAATGATCAATGGCTGCTCACAGCTGCTCACTGCCGAAAGCCGTACCTGTGG
GTCCGCCTCGGGGAGCATCATCTGTGGCGGTGGGAGGGCCCTGAGCAGCTGCTTCTGGTCACAGACTTCT
TCCCCCATCCTGGGTTCAATCCAGATCTCTCTGCCAATGACCACAATGATGATATTATGCTGATCCGGCT
ACCTCGGAAGGTCCGGCTGACTCCAGCTGTGCAACCCCTCAACCTCACCGAGAGCCGGCCACCTGTGGGC
ACCCAGTGCCTTATCTCTGGCTGGGGCAGTGTGTCAAGCTCCAAATTACAGTATCCAATGACACTGCAGT
GTGCCAACATTAGCATTCTGGACAACAAGCTCTGCCGCTGGGCATACCCGGGCCACATCTCTGAGAAGAT
GCTGTGCGCTGGCCTGTGGGAGGGTGGCCGAGGCTCTTGCCAGGGTGACTCTGGGGGACCCCTGGTGTGC
GAAGGAACCTTGGCAGGTATAGTGTCTGGAGGATCTGAGCCTTGTTCCAGACCCCGGAGACCCGCTGTCT
ACACTAACGTCTTTGACTACCTGGAGTGGATTGAAAGCACCATGGAAAAAAACTGA

Translation (251 aa):
MKLGLTLVLFSLLAGHCGADTRAVGARECVRNSQPWQAGLFYLTRQLCGATLINDQWLLTAAHCRKPYLW
VRLGEHHLWRWEGPEQLLLVTDFFPHPGFNPDLSANDHNDDIMLIRLPRKVRLTPAVQPLNLTESRPPVG
TQCLISGWGSVSSSKLQYPMTLQCANISILDNKLCRWAYPGHISEKMLCAGLWEGGRGSCQGDSGGPLVC
EGTLAGIVSGGSEPCSRPRRPAVYTNVFDYLEWIESTMEKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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