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Report for CCDS21675.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21675.1 Public Mus musculus 7 Or2ag20 23 108 98 CCDS HistoryNCBI Gene:257902Re-query CCDS DB by CCDS ID:21675.1Re-query CCDS DB by GeneID:257902See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21675.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080925.6 ENSMUSP00000079726.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080925.6Link to Ensembl Protein Viewer:ENSMUSP00000079726.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000080925Re-query CCDS DB by Protein ID:ENSMUSP00000079726
Original member Current member EBI ENSMUST00000098141.1 ENSMUSP00000095745.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098141.1Link to Ensembl Protein Viewer:ENSMUSP00000095745.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098141Re-query CCDS DB by Protein ID:ENSMUSP00000095745
Original member Current member NCBI NM_001011749.1 NP_001011749.1 Accepted alive Link to Nucleotide Sequence:NM_001011749.1Link to Protein Sequence:NP_001011749.1Re-query CCDS DB by Nucleotide ID:NM_001011749Re-query CCDS DB by Protein ID:NP_001011749Link to BLAST:NP_001011749.1

Chromosomal Locations for CCDS 21675.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 106864982 106865929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGAAGTCTGTAACTCCACCTTGAGAAGTGGCTTCATCTTGATGGGTATTTTGGATGACAATGATTTTC
CAGAACTGCTCTGTGCTACTATCACAGCCCTGTACCTTTTAGCTTTGACAAGCAATGGACTACTGCTGCT
GGTCATCACCATGGATACCCGGCTCCACGTGCCCATGTATCTTCTGCTCTGGCAACTCTCTCTCATGGAC
CTGCTCCTCACATCAGTCATCACTCCAAAGGCCATACTAGATTATCTTCTCAAAGACAACACTATCTCAT
TTGGGGGATGTGCCCTTCAGATGTTCCTGGCTTTGACACTTGGTACTGCAGAGGACCTCCTTCTGTCCTT
TATGGCCTATGACAGGTATGTGGCCATTTGTCATCCTCTGAACTACACAATTCTAATGAGTCAGAAAGTC
TGCTGTCTCATGATAGCCACTTCATGGAGTCTTGCATCTCTCAGTGCTCTAGGATATAGCATGTATACCA
TGCAATATCCTTTCTGCAAGTCCAGGCAGATCAGGCATCTCTTCTGTGAGATTCCTCCCTTGCTAAAGCT
GGCCTGTGCAGACACCTCCACATATGAACTCATGGTTTATCTGATGGGTGTGACCTTGCTCTTTCCAGCT
CTTGCTGCCATCCTGGCTTCCTACTCACTAATTCTATTCACTGTGCTGCACATGCCCTCTAATGAGGGCA
GGAGGAAAGCCCTTGTCACCTGCTCTTCCCATCTGACTGTGGTTGGGATGTGGTATGGAGGTGCTATTGT
CATGTATGTATTACCCAGTTCCTTCCACAGCCCCAAACAAGACAATATCAGCTCAGTTTTTTATACAATT
TTCACTCCGGCTTTGAATCCCCTCATCTACAGCCTAAGGAATAAGGAGGTCACTGGAGCTTTGAGGAGAG
TCCTTGGGAAAAGGTTGTCAGTACAGTCTACATTCTAG

Translation (315 aa):
MEVCNSTLRSGFILMGILDDNDFPELLCATITALYLLALTSNGLLLLVITMDTRLHVPMYLLLWQLSLMD
LLLTSVITPKAILDYLLKDNTISFGGCALQMFLALTLGTAEDLLLSFMAYDRYVAICHPLNYTILMSQKV
CCLMIATSWSLASLSALGYSMYTMQYPFCKSRQIRHLFCEIPPLLKLACADTSTYELMVYLMGVTLLFPA
LAAILASYSLILFTVLHMPSNEGRRKALVTCSSHLTVVGMWYGGAIVMYVLPSSFHSPKQDNISSVFYTI
FTPALNPLIYSLRNKEVTGALRRVLGKRLSVQSTF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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