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Report for CCDS83922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83922.1 Public Mus musculus 11 Gpr142 23 108 98 CCDS HistoryNCBI Gene:217302Re-query CCDS DB by CCDS ID:83922.1Re-query CCDS DB by GeneID:217302See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83922.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106584.1 ENSMUSP00000102194.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106584.1Link to Ensembl Protein Viewer:ENSMUSP00000102194.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106584Re-query CCDS DB by Protein ID:ENSMUSP00000102194
Original member Current member NCBI NM_001346772.1 NP_001333701.1 Accepted alive Link to Nucleotide Sequence:NM_001346772.1Link to Protein Sequence:NP_001333701.1Re-query CCDS DB by Nucleotide ID:NM_001346772Re-query CCDS DB by Protein ID:NP_001333701Link to BLAST:NP_001333701.1

Chromosomal Locations for CCDS 83922.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 114798924 114799017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114804305 114804466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114805886 114806745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1116 nt):
ATGCACCTGAATTCAAATCCCAACAGCTACATCTGTGACGCCTACCAACATGCTGATCTTCTATGGTCCT
TGTCTCCTCATGTGTTAACAAAAGCTGTGCAGCCACAAGTGACCCTGCTGCCTACAGTCAATGGTAGTAA
CCCAAGATACGATGGTGTGGATGGCCACTGGCCAGAGAGCCCAGAGAGGTCACCCTGTGTGGCTGGTATC
ATACCTGTCATCTATTACAGCGTCCTGCTGAGCCTGGGGCTGCCTGTCAACGTCCTGACTTCAGTGGCAC
TGGCCCGTCTTGCTGCCAGGACCAGGAAACCCTCCTATCACTATCTCCTGGCACTCACGGCTTCAGATAT
CGTCACCCAAGTGATCATCGTCTTCGTAGGCTTCCTCCTGCAGGGAGCTGTGCTGGCCCGCCAGGTGCCC
CAGGCCGTGGTGCGCACAGCTAACATCCTGGAGTTTGCTGCCAATCACGCCTCAGTCTGGATTGCAGTCT
TGTTCACGGTGGATCGCTACAATGCCCTGTGCCGCCCTCTACGCCATCGGGCCACCTCGTCCCCAGGCCG
GACCCACCGCGCTATTGCTGCTGTCATTGGCGTTACCCTCCTGACCGGCATCCCATTCTACTGGTGGCTG
GATGTGTGGAGGGATGCAGACCCTCCTAGCACTATGGACAAACTCCTCAAGTGGGCTCACTGCCTCATCG
TCTACTTCATTCCCTGCAATGTTTTCCTGGTCACCAACTCTGCCATCATCCTTCGGCTACGGAAGAGAGG
CCAGAGAGGGCTGCGGCCATTGGTGAGCAAGAGCACAGCCATCCTCCTGGGTGTCACCTCCCTCTTCGCC
CTCCTCTGGGCACCACGTATTATTGTCATGCTGTACCATCTGTATGTGGCCCCTGTTCACCGGGATTGGA
GGGTCCACCTGGCCTTGGACATAGCCAACATGTTGGCCATGCTCAACACAGAGGTCAACTTTGGCCTCTA
TTGCTTCATCAGCAAGACTTTCAGAGCCACTGTCCGACAGGTCATCTGTGATGTCCATATGGCTTGCGCC
TTAAAGTCACAGCCAAAGCAAACGGTGGTGGAACTCATGCTGAAGTCCGTAGGGACAGAGCTGTAG

Translation (371 aa):
MHLNSNPNSYICDAYQHADLLWSLSPHVLTKAVQPQVTLLPTVNGSNPRYDGVDGHWPESPERSPCVAGI
IPVIYYSVLLSLGLPVNVLTSVALARLAARTRKPSYHYLLALTASDIVTQVIIVFVGFLLQGAVLARQVP
QAVVRTANILEFAANHASVWIAVLFTVDRYNALCRPLRHRATSSPGRTHRAIAAVIGVTLLTGIPFYWWL
DVWRDADPPSTMDKLLKWAHCLIVYFIPCNVFLVTNSAIILRLRKRGQRGLRPLVSKSTAILLGVTSLFA
LLWAPRIIVMLYHLYVAPVHRDWRVHLALDIANMLAMLNTEVNFGLYCFISKTFRATVRQVICDVHMACA
LKSQPKQTVVELMLKSVGTEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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