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Report for CCDS51729.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51729.1 Public Mus musculus 6 Tmem229a 23 108 98 CCDS HistoryNCBI Gene:319832Re-query CCDS DB by CCDS ID:51729.1Re-query CCDS DB by GeneID:319832See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51729.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000127247.3 ENSMUSP00000116234.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000127247.3Link to Ensembl Protein Viewer:ENSMUSP00000116234.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000127247Re-query CCDS DB by Protein ID:ENSMUSP00000116234
Original member Current member NCBI NM_177013.3 NP_795987.2 Accepted alive Link to Nucleotide Sequence:NM_177013.3Link to Protein Sequence:NP_795987.2Re-query CCDS DB by Nucleotide ID:NM_177013Re-query CCDS DB by Protein ID:NP_795987Link to BLAST:NP_795987.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_795987.2 371 B9EJI9 371 100% 0 0

Chromosomal Locations for CCDS 51729.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 24954638 24955753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1116 nt):
ATGGCGGGCAGCGATGTGGCGAGTGAGGGGCCATCACCGAGGGACGGCGCGACCCGGAGACCCGGGGCCA
CCGGCGGACTGCGTAGCCAGGCGGCCGCCAGCTGCCCTGAGCCGCTGTCCGCTGCTGAAGCTCCGGCCGA
GCGCGGCGCGCTGCCCGCCTGGATGCGCCTCTACTTCTACGGGATGCACGGCATCACCCTGGACGTGCTG
GTATCCTCTGCCAGGCGCTTCGCCCGCAGCCTGGATCTGCGGATGCTGGGTTTCTCTTCACCCTACCGCT
GCCTCCTGCACTCGCTCACCCACTTCGCCCTGGAGCAGCTCTACCTGCAGCGGCCGCGCTGCCCCAGCGC
CTTCCTCTTCAATTTCCTGCTTTACCCCTCTGCGCACGTCGGGCTGCAGACCCTGGCTGGCCAGGCGCTA
CGGCTCAGCCTAGGCGGCGGGCCGGGGGGCGCGGCAGCGCCGGCGCTGGGGGCGCTCGACCTGGCGCTGC
AGTACGTGCTCGCGCTCTACCACGGCCAAGTGTTCCTGAAGCGCTTCTTGTGTTTGCGGTACCCGCGGCG
GCGCGACCAGCACACCAGGGACACGCTACCCGCAGCCCGGGACGCCCAGATCCTTTGGGAGGCTGGTGGC
CAGCGACGAGGACCGGGTGGCGCAAGGGGCACAGAACGATCTCCTACCCAGGGACTGCCCGACCTCCTCC
GCTTCCTTTTCTTCGGAATGCATGGCTTTCTGGATGAGATCTTCTTCACCTTCTTCTTCAATGTGCTGGG
GCAGGGGGACAGGGCCAGCAGTGGCCACACATCCCTCTGGTCTTTCTTCATGTACGGAAGTTGTAGTTTC
GTGGTGGAAAAACTCTACTTCCACCTTCACTACAGCCGTGGCTGGGGCACGTGGAAGCGGGTGCCCATCT
ATGTGATCTTCATCTATGCGTGGGAGTTTTCCTGGGGTCTGGGACTTCGAATGTGCGGGGCCTGTTCCTG
GGACTATTCTCACTATCCTCTTAATTTCATGGGCCTCATCACCTTGATGTATTTACCTGGCTGGCTATTT
CTTAGTGTGTACCAGGACCTCCTGTCCAACGTGTTGTGGCGGGTGCAGTATGTCCCAACGAACTAA

Translation (371 aa):
MAGSDVASEGPSPRDGATRRPGATGGLRSQAAASCPEPLSAAEAPAERGALPAWMRLYFYGMHGITLDVL
VSSARRFARSLDLRMLGFSSPYRCLLHSLTHFALEQLYLQRPRCPSAFLFNFLLYPSAHVGLQTLAGQAL
RLSLGGGPGGAAAPALGALDLALQYVLALYHGQVFLKRFLCLRYPRRRDQHTRDTLPAARDAQILWEAGG
QRRGPGGARGTERSPTQGLPDLLRFLFFGMHGFLDEIFFTFFFNVLGQGDRASSGHTSLWSFFMYGSCSF
VVEKLYFHLHYSRGWGTWKRVPIYVIFIYAWEFSWGLGLRMCGACSWDYSHYPLNFMGLITLMYLPGWLF
LSVYQDLLSNVLWRVQYVPTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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