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Report for CCDS36741.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36741.1 Public Mus musculus 13 Tmem167 23 108 98 CCDS HistoryNCBI Gene:66074Re-query CCDS DB by CCDS ID:36741.1Re-query CCDS DB by GeneID:66074See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36741.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000161568.7 ENSMUSP00000125314.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161568.7Link to Ensembl Protein Viewer:ENSMUSP00000125314.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161568Re-query CCDS DB by Protein ID:ENSMUSP00000125314
Original member NCBI NM_025335.3 NP_079611.2 Updated not alive Link to Nucleotide Sequence:NM_025335.3Link to Protein Sequence:NP_079611.2Re-query CCDS DB by Nucleotide ID:NM_025335Re-query CCDS DB by Protein ID:NP_079611
Current member NCBI NM_025335.4 NP_079611.2 Accepted alive Link to Nucleotide Sequence:NM_025335.4Link to Protein Sequence:NP_079611.2Re-query CCDS DB by Nucleotide ID:NM_025335Re-query CCDS DB by Protein ID:NP_079611Link to BLAST:NP_079611.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079611.2 72 Q9CR64-1 72 100% 0 0

Chromosomal Locations for CCDS 36741.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 90089781 90089783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 90098362 90098471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 90100908 90100942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 90104375 90104445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (219 nt):
ATGTCTGCCATTTTCAATTTTCAGAGTCTGTTGACTGTAATCTTGCTGCTTATATGTACATGTGCTTATA
TCCGATCCCTGGCACCCAGCATCCTGGACAGAAATAAAACTGGACTATTGGGAATATTTTGGAAGTGTGC
CCGAATTGGGGAACGCAAGAGTCCTTATGTCGCCATATGCTGTATAGTGATGGCCTTCAGCATCCTCTTC
ATACAGTAG

Translation (72 aa):
MSAIFNFQSLLTVILLLICTCAYIRSLAPSILDRNKTGLLGIFWKCARIGERKSPYVAICCIVMAFSILF
IQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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