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Report for CCDS22602.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22602.1 Public Mus musculus 8 Tppp3 23 108 98 CCDS HistoryNCBI Gene:67971Re-query CCDS DB by CCDS ID:22602.1Re-query CCDS DB by GeneID:67971See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22602.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014990.12 ENSMUSP00000014990.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014990.12Link to Ensembl Protein Viewer:ENSMUSP00000014990.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000014990Re-query CCDS DB by Protein ID:ENSMUSP00000014990
Original member Current member EBI ENSMUST00000176419.1 ENSMUSP00000134807.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176419.1Link to Ensembl Protein Viewer:ENSMUSP00000134807.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176419Re-query CCDS DB by Protein ID:ENSMUSP00000134807
Original member Current member EBI ENSMUST00000177126.7 ENSMUSP00000135040.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000177126.7Link to Ensembl Protein Viewer:ENSMUSP00000135040.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000177126Re-query CCDS DB by Protein ID:ENSMUSP00000135040
Original member Current member NCBI NM_026481.3 NP_080757.1 Accepted alive Link to Nucleotide Sequence:NM_026481.3Link to Protein Sequence:NP_080757.1Re-query CCDS DB by Nucleotide ID:NM_026481Re-query CCDS DB by Protein ID:NP_080757Link to BLAST:NP_080757.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080757.1 176 Q9CRB6 176 100% 0 0

Chromosomal Locations for CCDS 22602.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 105467836 105468024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105468156 105468309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105468440 105468627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGCAGCGAGCACGGACATAGCTGGGCTGGAGGAGAGCTTCCGGAAGTTTGCCATCCATGGCGACCCCA
AGGCCAGCGGGCAAGAGATGAATGGCAAGAACTGGGCCAAGCTGTGCAAGGACTGTAAGGTGGCCGACGG
AAAGGCCGTAACGGGCACCGACGTCGACATCGTCTTCTCCAAAGTCAAGGCGAAATCTGCTAGAGTAATC
AACTATGAGGAGTTCAAGAAGGCCCTGGAAGAGCTGGCAACTAAGCGGTTCAAGGGGAAGTCCAAGGAGG
AGGCCTTTGATGCCATCTGCCAGCTGATAGCGGGCAAGGAACCGGCCAACATTGGCGTCACCAAAGCTAA
AACGGGTGGTGCTGTGGACCGGCTGACGGACACCAGTAAGTATACGGGCTCCCACAAAGAACGCTTTGAT
GAGAGCGGCAAGGGAAAGGGCATCGCTGGACGGCAGGACATCCTGGACGACAGTGGCTACGTGAGTGCCT
ACAAAAACGCAGGCACCTATGACGCCAAGGTGAAGAAGTGA

Translation (176 aa):
MAASTDIAGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVI
NYEEFKKALEELATKRFKGKSKEEAFDAICQLIAGKEPANIGVTKAKTGGAVDRLTDTSKYTGSHKERFD
ESGKGKGIAGRQDILDDSGYVSAYKNAGTYDAKVKK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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