NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS47592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47592.1 Public Homo sapiens 7 ZNF679 24 110 108 CCDS HistoryNCBI Gene:168417Re-query CCDS DB by CCDS ID:47592.1Re-query CCDS DB by GeneID:168417See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47592.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255746.7 ENSP00000255746.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000255746.7Link to Ensembl Protein Viewer:ENSP00000255746.4Re-query CCDS DB by Nucleotide ID:ENST00000255746Re-query CCDS DB by Protein ID:ENSP00000255746
Original member Current member EBI ENST00000421025.3 ENSP00000416809.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000421025.3Link to Ensembl Protein Viewer:ENSP00000416809.1Re-query CCDS DB by Nucleotide ID:ENST00000421025Re-query CCDS DB by Protein ID:ENSP00000416809
Original member Current member NCBI NM_153363.3 NP_699194.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153363.3Link to Protein Sequence:NP_699194.2Re-query CCDS DB by Nucleotide ID:NM_153363Re-query CCDS DB by Protein ID:NP_699194Link to BLAST:NP_699194.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699194.2 411 Q8IYX0 411 100% 0 0

Chromosomal Locations for CCDS 47592.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 64249118 64249156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64260221 64260347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64260834 64260929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64265896 64266869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1236 nt):
ATGGCTAAAAGACCGGGATCCCCTGGAAGCCGAGAAATGGGACTGTTGACATTCAGAGATGTAGTCATAG
AATTCTCTCTGGAGGAGTGGCAATGCCTGGATCACGCTCAGCAGAATTTATATAGAGATGTGATGTTAGA
GAACTACAGAAACCTGGTCTCCCTGGGTATTGCTGTCTCTAAGCCAGACTTGATCACCTGTCTGGAGCAA
AATAAAGAGCCTTGGAATATAAAGAGAAATGAGATGGTAACCAAACACCCAGTTATGTGTTCTCATTTCA
CCCAAGACCTTCCGCCAGAGCTAGGCATAAAAGATTCACTCCAAAAAGTAATACCAAGAAGATATGGAAA
AAGTGGACATGACAATTTACAAGTAAAAACATGTAAAAGCATGGGTGAGTGTGAGGTGCAAAAAGGAGGT
TGTAATGAAGTTAACCAATGTTTGTCAACTACCCAAAACAAAATATTTCAGACTCATAAATGTGTCAAAG
TCTTCGGCAAATTTTCAAATTCCAATAGACATAAGACAAGACATACTGGAAAGAAACATTTCAAATGTAA
AAAATATGGCAAATCATTTTGCATGGTTTCACAACTACATCAACATCAGATAATTCATACTAGGGAGAAT
TCCTACCAATGTGAAGAATGCGGCAAACCCTTCAACTGCTCTTCAACCCTTTCTAAACATAAAAGAATTC
ATACTGGAGAGAAACCCTACAGATGTGAGGAATGTGGCAAAGCTTTTACCTGGTCCTCAACCCTTACTAA
ACATAGGAGAATTCATACTGGAGAAAAACCCTACACATGTGAAGAATGTGGCCAAGCCTTTAGCCGCTCC
TCAACACTTGCTAACCACAAGAGAATTCATACTGGAGAGAAACCATACACATGTGAAGAATGTGGCAAAG
CCTTTAGCTTATCCTCATCCCTCACTTACCACAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGA
AGAATGTGGCAAAGCCTTTAACTGCTCCTCAACCCTTAAGAAACATAAGATAATTCATACTGGAGAGAAA
CCCTACAAATGTAAAGAATGTGGGAAAGCCTTTGCCTTCTCCTCAACTCTTAATACTCATAAGAGGATTC
ATACTGGAGAGGAACCCTACAAATGTGAAGAATGTGACAAAGCTTTTAAGTGGTCCTCAAGTCTTGCTAA
TCATAAGAGTATGCATACTGGAGAGAAACCCTACAAATGTGAATAA

Translation (411 aa):
MAKRPGSPGSREMGLLTFRDVVIEFSLEEWQCLDHAQQNLYRDVMLENYRNLVSLGIAVSKPDLITCLEQ
NKEPWNIKRNEMVTKHPVMCSHFTQDLPPELGIKDSLQKVIPRRYGKSGHDNLQVKTCKSMGECEVQKGG
CNEVNQCLSTTQNKIFQTHKCVKVFGKFSNSNRHKTRHTGKKHFKCKKYGKSFCMVSQLHQHQIIHTREN
SYQCEECGKPFNCSSTLSKHKRIHTGEKPYRCEECGKAFTWSSTLTKHRRIHTGEKPYTCEECGQAFSRS
STLANHKRIHTGEKPYTCEECGKAFSLSSSLTYHKRIHTGEKPYTCEECGKAFNCSSTLKKHKIIHTGEK
PYKCKECGKAFAFSSTLNTHKRIHTGEEPYKCEECDKAFKWSSSLANHKSMHTGEKPYKCE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH