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Report for CCDS9009.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9009.1 Public Homo sapiens 12 GLIPR1L1 24 110 108 CCDS HistoryNCBI Gene:256710Re-query CCDS DB by CCDS ID:9009.1Re-query CCDS DB by GeneID:256710See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9009.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312442.2 ENSP00000310770.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312442.2Link to Ensembl Protein Viewer:ENSP00000310770.2Re-query CCDS DB by Nucleotide ID:ENST00000312442Re-query CCDS DB by Protein ID:ENSP00000310770
Original member Current member NCBI NM_152779.4 NP_689992.1 Accepted alive Link to Nucleotide Sequence:NM_152779.4Link to Protein Sequence:NP_689992.1Re-query CCDS DB by Nucleotide ID:NM_152779Re-query CCDS DB by Protein ID:NP_689992Link to BLAST:NP_689992.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689992.1 233 Q6UWM5-2 233 100% 0 0

Chromosomal Locations for CCDS 9009.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 75334729 75334902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75343693 75343938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75347622 75347722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75363102 75363190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 75370085 75370176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (702 nt):
ATGGCTCTGAAGAATAAATTCAGTTGTTTATGGATCTTGGGTCTGTGTTTGGTAGCCACTACATCTTCCA
AAATCCCATCCATCACTGACCCACACTTTATAGACAACTGCATAGAAGCCCACAACGAATGGCGTGGCAA
AGTCAACCCTCCCGCGGCCGACATGAAATACATGATTTGGGATAAAGGTTTAGCAAAGATGGCTAAAGCA
TGGGCAAACCAGTGCAAATTTGAACATAATGACTGTTTGGATAAATCATATAAATGCTATGCAGCTTTTG
AATATGTTGGAGAAAATATCTGGTTAGGTGGAATAAAGTCATTCACACCAAGACATGCCATTACGGCTTG
GTATAATGAAACCCAATTTTATGATTTTGATAGTCTATCATGCTCCAGAGTCTGTGGCCATTATACACAG
TTAGTTTGGGCCAATTCATTTTATGTCGGTTGTGCAGTTGCAATGTGTCCTAACCTTGGGGGAGCTTCAA
CTGCAATATTTGTATGCAACTACGGACCTGCAGGAAATTTTGCAAATATGCCTCCTTACGTAAGAGGAGA
ATCTTGCTCTCTCTGCTCAAAAGAAGAGAAATGTGTAAAGAACCTCTGCAAAAATCCATTTCTGAAGCCA
ACGGGGAGAGCACCTCAGCAGACAGCCTTTAATCCATTCAGCTTAGGTTTTCTTCTTCTGAGAATCTTTT
AA

Translation (233 aa):
MALKNKFSCLWILGLCLVATTSSKIPSITDPHFIDNCIEAHNEWRGKVNPPAADMKYMIWDKGLAKMAKA
WANQCKFEHNDCLDKSYKCYAAFEYVGENIWLGGIKSFTPRHAITAWYNETQFYDFDSLSCSRVCGHYTQ
LVWANSFYVGCAVAMCPNLGGASTAIFVCNYGPAGNFANMPPYVRGESCSLCSKEEKCVKNLCKNPFLKP
TGRAPQQTAFNPFSLGFLLLRIF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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