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Report for CCDS47741.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47741.1 Public Homo sapiens 7 ZNF862 24 110 108 CCDS HistoryNCBI Gene:643641Re-query CCDS DB by CCDS ID:47741.1Re-query CCDS DB by GeneID:643641See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 47741.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000223210.5 ENSP00000223210.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000223210.5Link to Ensembl Protein Viewer:ENSP00000223210.4Re-query CCDS DB by Nucleotide ID:ENST00000223210Re-query CCDS DB by Protein ID:ENSP00000223210
Original member Current member NCBI NM_001099220.3 NP_001092690.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001099220.3Link to Protein Sequence:NP_001092690.1Re-query CCDS DB by Nucleotide ID:NM_001099220Re-query CCDS DB by Protein ID:NP_001092690Link to BLAST:NP_001092690.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092690.1 1169 O60290-1 1169 100% 0 0

Chromosomal Locations for CCDS 47741.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 149838612 149838635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149844625 149844736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149846151 149846255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149847735 149848432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149850161 149850338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149859422 149859526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149860383 149862494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149864109 149864284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3510 nt):
ATGGAGCCCAGAGAGTCGGGGAAGGCTCCTGTGACGTTTGATGACATCACTGTGTACTTACTCCAGGAGG
AATGGGTGCTGCTGAGCCAGCAACAGAAGGAGCTCTGTGGTTCCAACAAGCTGGTGGCACCACTGGGACC
AACTGTTGCCAATCCTGAGCTGTTCCGCAAGTTCGGACGAGGGCCAGAGCCATGGCTTGGCAGCGTCCAG
GGCCAGAGGAGCCTTCTGGAGCATCACCCAGGAAAAAAACAGATGGGCTACATGGGAGAAATGGAGGTGC
AAGGTCCCACCAGGGAGAGTGGACAGTCCCTCCCGCCTCAGAAGAAAGCCTACCTTTCCCACCTCAGTAC
AGGCAGTGGACACATCGAGGGAGACTGGGCCGGAAGAAACAGGAAACTTCTGAAGCCCCGGTCCATCCAG
AAGTCGTGGTTTGTGCAGTTTCCGTGGCTGATCATGAATGAGGAGCAGACGGCTCTGTTCTGCTCTGCTT
GCCGAGAATACCCCTCCATCAGGGACAAACGGTCAAGACTAATAGAAGGTTATACAGGACCATTCAAGGT
GGAGACTCTCAAATACCACGCGAAGAGCAAGGCCCACATGTTCTGTGTCAATGCCTTGGCAGCGAGGGAC
CCCATCTGGGCAGCCCGGTTCCGGAGCATCAGAGACCCACCTGGAGATGTTCTGGCCAGCCCGGAGCCGC
TCTTCACTGCAGATTGCCCCATATTCTACCCCCCAGGGCCTCTGGGAGGATTTGATAGCATGGCTGAGCT
CCTGCCAAGTTCAAGAGCTGAACTAGAGGACCCTGGGGGGGATGGAGCAATTCCTGCAATGTATCTAGAC
TGCATTTCAGATTTGAGGCAAAAAGAAATCACTGATGGCATCCACAGCTCCTCAGACATTAATATTTTAT
ATAATGATGCAGTAGAATCCTGCATTCAGGACCCTTCTGCAGAGGGGCTGTCGGAGGAGGTTCCTGTGGT
GTTTGAGGAGCTGCCGGTGGTGTTCGAGGATGTGGCAGTGTATTTCACCCGGGAGGAGTGGGGCATGCTA
GACAAGCGGCAGAAGGAGCTGTACAGAGACGTGATGCGGATGAACTACGAGCTGTTGGCATCCTTGGGAC
CTGCCGCTGCCAAGCCAGACTTGATCTCCAAACTGGAGCGGAGGGCTGCACCCTGGATCAAGGACCCAAA
TGGGCCAAAGTGGGGGAAAGGTCGTCCTCCAGGGAACAAGAAGATGGTGGCAGTGAGAGAGGCAGACACA
CAGGCCTCGGCTGCAGACTCCGCGTTGCTTCCAGGCTCTCCCGTGGAGGCCCGTGCCTCCTGCTGCAGTT
CCAGCATTTGTGAGGAAGGAGATGGACCTAGGAGAATCAAGAGGACATACAGGCCCCGTTCCATTCAGAG
GTCATGGTTTGGGCAGTTCCCATGGTTAGTAATTGACCCCAAAGAGACCAAACTCTTCTGCTCAGCCTGC
ATAGAAAGACCTAATCTCCATGATAAATCATCTCGGTTAGTCAGAGGTTACACGGGGCCTTTTAAAGTGG
AGACTTTAAAATACCATGAAGTCAGCAAAGCGCACAGGCTCTGTGTCAACACGGTTGAAATCAAGGAAGA
CACCCCTCACACTGCCCTCGTTCCAGAGATCTCCAGCGACCTCATGGCCAACATGGAGCACTTTTTCAAT
GCCGCCTACTCCATTGCATACCACTCAAGGCCCCTGAATGACTTTGAGAAGATCCTGCAGCTCCTCCAAA
GCACGGGGACCGTGATATTAGGCAAGTACCGCAATCGCACGGCGTGCACTCAGTTCATCAAGTACATCTC
AGAGACCCTGAAGAGGGAGATCCTGGAGGACGTGCGGAACTCGCCCTGTGTGAGCGTGCTGCTGGACAGC
TCCACCGACGCCTCCGAGCAGGCCTGCGTGGGGATTTACATCCGCTACTTCAAGCAGATGGAGGTGAAAG
AGTCCTACATCACTCTGGCCCCTCTCTACAGTGAGACAGCAGATGGGTACTTCGAGACCATCGTTTCTGC
CCTGGATGAGCTGGACATCCCCTTCCGGAAGCCTGGCTGGGTGGTGGGGCTGGGGACGGATGGCTCAGCC
ATGTTGAGCTGCAGAGGAGGCCTTGTGGAAAAGTTCCAGGAGGTCATCCCGCAGCTGCTGCCTGTCCACT
GCGTGGCCCACCGGCTGCACCTGGCTGTGGTGGACGCCTGCGGGAGCATCGATCTGGTGAAGAAGTGTGA
CCGGCACATCCGCACCGTCTTCAAGTTTTATCAGTCCTCAAACAAGAGGCTGAACGAGCTGCAGGAAGGT
GCGGCGCCTCTGGAGCAGGAGATCATCCGCCTGAAGGATCTGAATGCGGTCCGCTGGGTGGCCAGCAGGA
GGCGCACGCTGCACGCGCTGCTCGTGAGCTGGCCCGCCCTGGCCAGGCACCTCCAGAGGGTGGCAGAGGC
TGGGGGCCAGATTGGGCACCGGGCCAAAGGGATGCTGAAGCTCATGCGCGGCTTCCACTTTGTCAAGTTC
TGCCACTTCCTGTTGGACTTCCTGAGCATCTACAGGCCTCTGTCCGAGGTGTGCCAGAAGGAGATCGTGC
TGATTACAGAGGTGAACGCCACGCTGGGCCGCGCCTACGTGGCACTGGAGAGCCTCCGTCACCAGGCAGG
GCCCAAAGAGGAAGAATTCAACGCCAGCTTCAAGGATGGGCGGCTCCACGGCATCTGCTTGGACAAACTG
GAGGTAGCGGAACAGCGGTTCCAGGCGGATAGGGAGAGGACAGTCCTGACGGGGATTGAGTACCTCCAGC
AGAGGTTTGACGCAGACCGACCCCCACAGCTGAAGAACATGGAGGTGTTTGACACCATGGCCTGGCCAAG
TGGGATTGAACTTGCCAGTTTTGGGAATGATGACATTCTCAACCTGGCCAGGTATTTCGAGTGCTCCCTC
CCAACAGGATACAGTGAGGAAGCTCTGCTGGAGGAGTGGCTGGGCCTGAAAACCATTGCCCAGCACCTCC
CGTTCTCCATGCTCTGCAAAAACGCCCTGGCCCAGCACTGCCGCTTCCCCCTGCTAAGCAAGCTCATGGC
CGTGGTGGTCTGTGTGCCCATCTCCACCTCTTGCTGTGAGCGGGGGTTCAAGGCCATGAACCGAATCAGG
ACCGATGAGAGGACCAAGCTCTCCAACGAGGTGCTCAACATGCTCATGATGACAGCTGTGAACGGCGTGG
CCGTCACGGAGTACGACCCCCAGCCCGCCATCCAGCACTGGTACCTGACCTCCTCAGGCCGGCGTTTCAG
CCATGTCTACACCTGTGCCCAGGTGCCAGCCCGCTCCCCTGCAAGCGCCAGGCTCAGGAAGGAGGAGATG
GGAGCCCTCTATGTGGAGGAGCCCAGGACCCAGAAGCCACCCATCCTGCCCTCCAGGGAAGCAGCGGAGG
TTCTGAAGGACTGCATCATGGAGCCTCCCGAGAGACTCCTGTATCCCCACACCAGCCAGGAGGCCCCCGG
GATGTCCTGA

Translation (1169 aa):
MEPRESGKAPVTFDDITVYLLQEEWVLLSQQQKELCGSNKLVAPLGPTVANPELFRKFGRGPEPWLGSVQ
GQRSLLEHHPGKKQMGYMGEMEVQGPTRESGQSLPPQKKAYLSHLSTGSGHIEGDWAGRNRKLLKPRSIQ
KSWFVQFPWLIMNEEQTALFCSACREYPSIRDKRSRLIEGYTGPFKVETLKYHAKSKAHMFCVNALAARD
PIWAARFRSIRDPPGDVLASPEPLFTADCPIFYPPGPLGGFDSMAELLPSSRAELEDPGGDGAIPAMYLD
CISDLRQKEITDGIHSSSDINILYNDAVESCIQDPSAEGLSEEVPVVFEELPVVFEDVAVYFTREEWGML
DKRQKELYRDVMRMNYELLASLGPAAAKPDLISKLERRAAPWIKDPNGPKWGKGRPPGNKKMVAVREADT
QASAADSALLPGSPVEARASCCSSSICEEGDGPRRIKRTYRPRSIQRSWFGQFPWLVIDPKETKLFCSAC
IERPNLHDKSSRLVRGYTGPFKVETLKYHEVSKAHRLCVNTVEIKEDTPHTALVPEISSDLMANMEHFFN
AAYSIAYHSRPLNDFEKILQLLQSTGTVILGKYRNRTACTQFIKYISETLKREILEDVRNSPCVSVLLDS
STDASEQACVGIYIRYFKQMEVKESYITLAPLYSETADGYFETIVSALDELDIPFRKPGWVVGLGTDGSA
MLSCRGGLVEKFQEVIPQLLPVHCVAHRLHLAVVDACGSIDLVKKCDRHIRTVFKFYQSSNKRLNELQEG
AAPLEQEIIRLKDLNAVRWVASRRRTLHALLVSWPALARHLQRVAEAGGQIGHRAKGMLKLMRGFHFVKF
CHFLLDFLSIYRPLSEVCQKEIVLITEVNATLGRAYVALESLRHQAGPKEEEFNASFKDGRLHGICLDKL
EVAEQRFQADRERTVLTGIEYLQQRFDADRPPQLKNMEVFDTMAWPSGIELASFGNDDILNLARYFECSL
PTGYSEEALLEEWLGLKTIAQHLPFSMLCKNALAQHCRFPLLSKLMAVVVCVPISTSCCERGFKAMNRIR
TDERTKLSNEVLNMLMMTAVNGVAVTEYDPQPAIQHWYLTSSGRRFSHVYTCAQVPARSPASARLRKEEM
GALYVEEPRTQKPPILPSREAAEVLKDCIMEPPERLLYPHTSQEAPGMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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