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Report for CCDS54202.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54202.1 Public Homo sapiens 19 DUS3L 24 110 108 CCDS HistoryNCBI Gene:56931Re-query CCDS DB by CCDS ID:54202.1Re-query CCDS DB by GeneID:56931See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54202.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320699.12 ENSP00000315558.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000320699.12Link to Ensembl Protein Viewer:ENSP00000315558.7Re-query CCDS DB by Nucleotide ID:ENST00000320699Re-query CCDS DB by Protein ID:ENSP00000315558
Original member Current member NCBI NM_001161619.2 NP_001155091.1 Accepted alive Link to Nucleotide Sequence:NM_001161619.2Link to Protein Sequence:NP_001155091.1Re-query CCDS DB by Nucleotide ID:NM_001161619Re-query CCDS DB by Protein ID:NP_001155091Link to BLAST:NP_001155091.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001155091.1 408 Q96G46-3 408 100% 0 0

Chromosomal Locations for CCDS 54202.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5785203 5785275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5785383 5785511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5785603 5785791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5786467 5786542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5786749 5786845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5787061 5787171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5787296 5787361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5787589 5787705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5788024 5788176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5788357 5788398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5790260 5790335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5791044 5791141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGGCGGAGGGAACGGCGGAGGCTCCTCTAGAGAATGGTGGTGGTGGCGACTCGGGAGCCGGAGCTTTGG
AACGAGGAGTGGCGCCCATTAAGCGTCAATACCTCACCACCAAGGAGCAGTTTCACCAATTCCTGGAAGC
CAAAGGGCAGGAGAAGACTTGCCGGGAAACCGAGCTGGACATCCGTGGCAAACTTTACCTGGCCCCCCTC
ACCACGTGTGGGAACCTGCCCTTCCGACGGATCTGCAAGCGCTTCGGGGCGGATGTGACATGTGGAGAGA
TGGCCGTCTGCACCAACCTGCTGCAGGGCCAGATGTCCGAGTGGGCCCTACTCAAACGCCACCAGTGTGA
GGACATCTTTGGCGTCCAGCTGGAGGGCGCCTTCCCCGACACCATGACCAAGTGTGCCGAGCTGCTGAGC
CGCACCGTGGAGGTGGACTTTGTGGACATCAACGTCGGCTGCCCCATCGACCTCGTGTACAAGAAGGGTG
GGGGCTGTGCCCTCATGAATCGCTCCACCAAGTTCCAGCAGATCGTCCGTGGCATGAACCAGGTGCTGGA
TGTGCCGCTGACTGTGAAGATCCGCACAGGCGTCCAGGAGCGTGTGAACCTGGCGCACCGCCTGCTGCCC
GAGCTGCGGGACTGGGGCGTGGCACTCGTCACGCTCCACGGCCGCTCTCGGGAGCAGCGCTACACCAAGC
TAGCCGACTGGCAGTACATCGAGGAGTGCGTGCAGGCCGCCAGCCCCATGCCCCTGTTCGGAAATGGGGA
CATCTTGTCATTTGAGGATGCCAACCGCGCCATGCAGACTGGTGTCACCGGGATCATGATTGCCCGTGGC
GCCCTGCTCAAGCCGTGGCTCTTCACGGAGATCAAGGAGCAGCGGCACTGGGACATCTCGTCGTCCGAGC
GCCTGGACATCCTGCGGGACTTCACCAACTACGGCCTGGAGCACTGGGGCTCGGACACGCAGGGCGTGGA
GAAGACCCGGCGCTTTCTGCTCGAGTGGCTGTCCTTCCTGTGCCGGTACGTGCCCGTGGGGCTGCTGGAG
CGGCTCCCACAGAGGATCAACGAGCGGCCGCCCTACTACCTGGGCCGCGACTACCTGGAGACGCTGATGG
CCAGCCAGAAGGCAGCCGACTGGATCCGCATCAGCGAGATGCTCCTTGGGCCAGTGCCCCCCAGCTTCGC
CTTCTTGCCGAAGCACAAGGCCAACGCGTACAAGTAG

Translation (408 aa):
MAEGTAEAPLENGGGGDSGAGALERGVAPIKRQYLTTKEQFHQFLEAKGQEKTCRETELDIRGKLYLAPL
TTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDIFGVQLEGAFPDTMTKCAELLS
RTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQERVNLAHRLLP
ELRDWGVALVTLHGRSREQRYTKLADWQYIEECVQAASPMPLFGNGDILSFEDANRAMQTGVTGIMIARG
ALLKPWLFTEIKEQRHWDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLEWLSFLCRYVPVGLLE
RLPQRINERPPYYLGRDYLETLMASQKAADWIRISEMLLGPVPPSFAFLPKHKANAYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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