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Report for CCDS72804.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72804.1 Public Homo sapiens 1 C1orf141 24 110 108 CCDS HistoryNCBI Gene:400757Re-query CCDS DB by CCDS ID:72804.1Re-query CCDS DB by GeneID:400757See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 72804.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000475209.6 ENSP00000432856.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000475209.6Link to Ensembl Protein Viewer:ENSP00000432856.2Re-query CCDS DB by Nucleotide ID:ENST00000475209Re-query CCDS DB by Protein ID:ENSP00000432856
Original member Current member NCBI NM_001276352.2 NP_001263281.1 Accepted alive Link to Nucleotide Sequence:NM_001276352.2Link to Protein Sequence:NP_001263281.1Re-query CCDS DB by Nucleotide ID:NM_001276352Re-query CCDS DB by Protein ID:NP_001263281Link to BLAST:NP_001263281.1

Chromosomal Locations for CCDS 72804.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 67093580 67093604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67096252 67096321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67103238 67103382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67111577 67111644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67115352 67115464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67125752 67125909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67127166 67127240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGGCAGAAAAAATCCTAGAGAAGTTGGATGTCCTTGATAAGCAAGCAGAGATAATCTTGGCCAGAAGAA
CAAAGATAAACAGGCTTCAGAGTGAAGGAAGAAAAACAACTATGGCTATACCCCTGACATTTGATTTTCA
GTTGGAATTTGAAGAAGCTCTTGCTACATCCGCGTCTAAGGCAATATCAAAGATCAAAGAAGACAAGTCA
TGCAGCATTACAAAATCAAAAATGCATGTCTCTTTCAAATGTGAGCCTGAACCTAGAAAGAGTAATTTTG
AAAAGTCAAATTTAAGACCATTCTTTATTCAAACAAATGTAAAAAATAAAGAAAGTGAGTCAACAGAGCC
AGTAGAAGAACATCTAAAATCAAGATCTATTAGACCCTATCTTTATCTTAAGGATACAACTGAGATGGAA
AATGCAGGGCCTTTGAATGTTCTATATTCACAGCATAGACAAGCATGTAGAAGATCACTGGGTTCTACAG
ACTTTTCTCCTATGTTCAACATTCAGTCTAATGCTCATAAAAAGGAAAAAGACTCTACTTTATTTACAGC
TCAAATTGAAAAAAAACCTAGGAAACCATTGGATTCTGTTGGTCTCTTAGAAGGTGATAGAAATAAAAGG
AACAAAAGGACACAAATCCCATAA

Translation (217 aa):
MAEKILEKLDVLDKQAEIILARRTKINRLQSEGRKTTMAIPLTFDFQLEFEEALATSASKAISKIKEDKS
CSITKSKMHVSFKCEPEPRKSNFEKSNLRPFFIQTNVKNKESESTEPVEEHLKSRSIRPYLYLKDTTEME
NAGPLNVLYSQHRQACRRSLGSTDFSPMFNIQSNAHKKEKDSTLFTAQIEKKPRKPLDSVGLLEGDRNKR
NKRTQIP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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