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Report for CCDS31798.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31798.1 Public Homo sapiens 12 AQP6 24 110 108 CCDS HistoryNCBI Gene:363Re-query CCDS DB by CCDS ID:31798.1Re-query CCDS DB by GeneID:363See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31798.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315520.10 ENSP00000320247.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000315520.10Link to Ensembl Protein Viewer:ENSP00000320247.5Re-query CCDS DB by Nucleotide ID:ENST00000315520Re-query CCDS DB by Protein ID:ENSP00000320247
Original member Current member EBI ENST00000615425.1 ENSP00000477688.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615425.1Link to Ensembl Protein Viewer:ENSP00000477688.1Re-query CCDS DB by Nucleotide ID:ENST00000615425Re-query CCDS DB by Protein ID:ENSP00000477688
Original member Current member NCBI NM_001652.4 NP_001643.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001652.4Link to Protein Sequence:NP_001643.2Re-query CCDS DB by Nucleotide ID:NM_001652Re-query CCDS DB by Protein ID:NP_001643Link to BLAST:NP_001643.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001643.2 282 Q13520 282 100% 0 0

Chromosomal Locations for CCDS 31798.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 49973174 49973575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49974324 49974482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49974746 49974826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49975465 49975671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (849 nt):
ATGGATGCAGTGGAGCCAGGGGGACGTGGCTGGGCCAGCATGTTGGCGTGCAGGCTTTGGAAAGCCATCA
GCAGGGCGCTGTTTGCAGAGTTCCTGGCCACGGGGCTGTATGTGTTCTTTGGCGTGGGCTCAGTCATGCG
CTGGCCCACAGCACTTCCCTCCGTGCTACAGATTGCCATCACCTTCAACCTGGTCACCGCCATGGCTGTG
CAGGTCACCTGGAAGGCCAGCGGGGCCCACGCCAACCCCGCCGTGACGCTGGCCTTCCTCGTAGGCTCCC
ACATCTCTCTGCCCCGTGCTGTGGCCTATGTGGCTGCCCAGCTGGTGGGGGCCACGGTGGGGGCTGCTCT
GCTTTATGGGGTCATGCCGGGAGACATCCGAGAGACCCTTGGGATCAACGTGGTCCGGAACAGTGTCTCA
ACTGGCCAGGCGGTGGCAGTGGAGCTGCTTCTGACCCTGCAGCTGGTGCTCTGTGTCTTCGCTTCCACCG
ACAGCCGTCAGACATCAGGCTCCCCGGCCACCATGATTGGGATCTCTGTGGCACTGGGCCACCTCATTGG
GATCCACTTCACTGGCTGCTCCATGAATCCAGCCCGCTCCTTCGGCCCTGCCATCATCATTGGGAAGTTC
ACAGTCCACTGGGTCTTCTGGGTGGGGCCCCTGATGGGAGCCCTCCTGGCCTCACTGATCTACAACTTCG
TCCTGTTCCCCGACACCAAGACCCTGGCGCAGCGGCTGGCTATCCTCACAGGCACCGTAGAGGTGGGGAC
AGGGGCAGGGGCAGGGGCGGAGCCCCTGAAGAAGGAATCCCAGCCGGGTTCGGGAGCCGTGGAGATGGAG
AGTGTGTGA

Translation (282 aa):
MDAVEPGGRGWASMLACRLWKAISRALFAEFLATGLYVFFGVGSVMRWPTALPSVLQIAITFNLVTAMAV
QVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETLGINVVRNSVS
TGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGKF
TVHWVFWVGPLMGALLASLIYNFVLFPDTKTLAQRLAILTGTVEVGTGAGAGAEPLKKESQPGSGAVEME
SV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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