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Report for CCDS91391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91391.1 Public Homo sapiens 10 SCART1 24 110 108 CCDS HistoryNCBI Gene:619207Re-query CCDS DB by CCDS ID:91391.1Re-query CCDS DB by GeneID:619207See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000640237.2 ENSP00000491516.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000640237.2Link to Ensembl Protein Viewer:ENSP00000491516.1Re-query CCDS DB by Nucleotide ID:ENST00000640237Re-query CCDS DB by Protein ID:ENSP00000491516
Original member Current member NCBI NM_001396050.1 NP_001382979.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001396050.1Link to Protein Sequence:NP_001382979.1Re-query CCDS DB by Nucleotide ID:NM_001396050Re-query CCDS DB by Protein ID:NP_001382979Link to BLAST:NP_001382979.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382979.1 1027 Q4G0T1-1 1027 100% 0 0

Chromosomal Locations for CCDS 91391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 133453998 133454064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133456237 133456554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133457279 133457575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133458360 133458656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133459021 133459326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133459487 133460170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133464606 133464911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133465106 133465174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133465251 133465565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133466235 133466381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133467198 133467353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133467847 133467968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3084 nt):
ATGAGGGCAGCTCTCTGGACCCTGGGACTCGGGCCCCTTCTTCTGAATCTCTGGGCAGTCCCCATTGGTG
GACCAGGTGCTCTGAGGCTGGCGTACAGACACAGCACGTGCGACGGAGTGGTGTTGGTCCGACACCACGG
GGCATGGGGATACGTGTGCAACCAGGAGTGGACGCTGGCAGAGGCCTCTGTCGTGTGCAGGCAGCTGGGC
TGCGGCCCTGCCGTGGGCGCCCCCAAGTATGTCCCGCTGCCTGGAGAGATGGCCCAGCCCTGGCTTCACA
ACGTGTCCTGCCGGGGCAACGAGTCCTCCCTCTGGGAGTGCAGCCTTGGCTCATGGTGCCAGAGCCCGTG
CCCCCACGCATGGGTGGTGGTCGCGCTGTGCTCCAACGGCACTTTCCGGGAGCTCCGGCTGGTGAAGGGC
CGCAGTCCCTGCGCGGGACTCCCCGAGATCAGAAACGTGAATGGGGTGGACCGCCTCTGTGTCCTGCATG
TGGAGGAGGCCATGGTGTTCTGCCGGGAGCTGGGGTGCGGCCCTGTGCTCCAGGCCCCCCGCCGGGACGT
GGGCGTCGTCAGGAAGTACCTGGCCTGCAGGGGTACCGAGCCCACCATCCGCAGCTGCAGACTGGACAAC
AACTTCCGCAGCGGCTGCGACCTGCGGCTGGACGCAGAGGTGGTCTGCTCAGGACACACCGAGGCCCGAC
TGGTGGGCGGCGAGCACCCCTGCGCCGGGCGCCTGGAGGTGACCTGGGGCACCGTCTGTGATGCGGCCCT
GGACCTGGCCACGGCCCACGTGGTGTGCCGGGAGCTGCAGTGTGGGGCGGTCGTGTCCACGCCCGAGGGC
GCCCGCTTCGGCCGGGGCTCGGGGCCGGTGTGGACGGAGGCCTTCCGCTGTGCGGGCAACGAGTCGCTGC
TGTTCCACTGCCCACGGGGGCGTGGGAGCCAGTGTGGGCATGGTCACGACGCGGGGCTCAGGTGCTCAGA
GTTCAGGATGGTCAACGGCAGCAGCAGCTGTGAGGGCCGCGTGGAGTTCCAGGTGCAGGGGTCCTGGGCA
CCCCTCTGTGCCACCCACTGGGACATAGCAGATGCCACCGTCCTCTGCCACCAGCTCAACTGTGGCAACG
CGGTGGCCGCACCTGGAGGAGGCCATTTTGGGGACGGGGACGCTGCCATCTGGCCTGATGCCTTTCACTG
TGAGGGGACAGAGTCCTACTTGTGGAATTGCCCAGTAAGCACCCTGGGGGCCCCGGCCTGTGCCCCGGGA
AACACAGCCTCCGCGGTCTGCTCAGGTCTGGCCCACGCCCTGCGACTGAGGGAAGGACAGAGCCGCTGTG
ACGGCCGCGTGGAGGTCTCCCTGGATGGCGTGTGGGGCCGCGTCCTGGACGATGCCTGGGACCTGCGCGG
CGCGGGCGTGGTGTGCCGGCAACTCGGGTGCAGAGGGGCCCAGCAAGCCTATGACGCACCTGCCCCCAGC
CGCGGATCCGTCCAGGTGGCGCTGAGCCGCGTGCGCTGTCTGGGCACCGAAACCCGCCTGACTCAGTGCA
ACGTGTCCGCGACCCTGCAGGAGCCCGCGGGGACCTCGCGGGACGCCGGCGTGGTGTGCTCCGGTGAGGT
CGGAACCGCGTCCCCCATGGCCCGTCGCCACGGGATCCCGGGCGCCCTGACTCTGTCTCTCCACAGGGAG
CCTCAGGGTGCGGCTGGCCGCGGGGCCGGGGCGCTGCACGGGGGCGCGTGGGGCACCGTGTGTGACGATG
CCTGGGACCTGCGGGACGCGCACGTGGTCTGCAGGCAGCTGGGCTGTGGCCGCGCCCTGAGCGCCCTGGG
GGCCGCACACTTCGGAGCCGGGGCAGGGCGCATCTGGCTGGACGAGCTGGGCTGCCAGGGCCACGAGTCT
GCGCTGTGGCAGTGCCCGTCGGCGGGCTGGGGGCGGCACGACTGGAGGCACAAGGAGGACGCCGGCGTCT
TCTGCTCAGAGTCGGTGGCTCTGAGGCTGCGAGGTGGGACCTGCTGCTGTGCTGGGTGGCTGGACGTGTT
CTACAATGGGACCTGGGGCGCCATGTGCAGCAATGCCCTGAAGGACCTCTCCTTGTCCATCATCTGCAAG
CAGCTGGGGTGTGGGGTGTGGGGAGTGGGGCTGGCTGGAGAACAGGCCCTTCCCCTCTGCGGGCACCGGG
ACCGCCTGGGTGGACAACATCGAGTGCCGCAGGCTGCCCAACTCCACTCTGTGGCAATGCCCTTCCCACC
CATGGCACCCGCACTCTTGCGACCTTCGAGAGCAGGATTGTCAGAGGACAGGCCACAGGCTGCTGGGGAG
CCCCTCAACTGCTCCTCCTGGCTCGGCTGCCCAGAGGAGGGCGCACTGCGCGTGCGCGGGGGCGAGGACC
GCTGCTCCGGGCGCGTGGAGCTCTGGCACGCGGGCTCCTGGGGCACCGTGTGCGACGATGGCTGGGACCT
GGCGGACGCGGAGGTCGTGTGCCGCCAGCTGGGCTGTGGTCGGGCCGTCGCCGCCCTGGGGGCCGCCGCC
TTTGGCCCTGGCTCCGGGCCCGTGTGGCTGGACGAGGTGGGGTGCCGGGGCAGCGAGGCGTCCCTGTGGG
GCTGCCCTGCGGAGCGGTGGGGACGCGGAGACCGCGCGCACGAGGAGGACGCGGGCGTGCGCTGCTGGGA
GCCTGGCCCAGGCCCCCCACTGCCTGCAGCTCCCTTCCGGACATTCTGGGTGGTCAGTGTCGTCCTGGGA
TCCCTTCTTGGTCTTCTCCTTCTGGGCCTCATGGCTTTTCTGATTCTGCCTCGAGTCACACAAGCCATGC
AGAGGGGTCTGGGAAGATCCGAGGTATCTCCTGGAGAAGCCATCTATGATGTCATTGGGGAAATGCCGCC
AGCAGGACTGTACGAGGAAATCATGGAGGCCGAGGCTGTGCTCCAAGATGAGGAGGACGGAAGTGTGGTG
AAGGTGGACACAGAAGCCGCAGTTTCAGGGGAGGTGTCTAACCTCCTGGAGGGACAGTCTATACGTGCGG
AGGGAGGACACAGCAGACCTGTTTCTCAGGGATATGACGAGGCTGCGTTTCCTCTGGAGGAGATGACGTT
GTAA

Translation (1027 aa):
MRAALWTLGLGPLLLNLWAVPIGGPGALRLAYRHSTCDGVVLVRHHGAWGYVCNQEWTLAEASVVCRQLG
CGPAVGAPKYVPLPGEMAQPWLHNVSCRGNESSLWECSLGSWCQSPCPHAWVVVALCSNGTFRELRLVKG
RSPCAGLPEIRNVNGVDRLCVLHVEEAMVFCRELGCGPVLQAPRRDVGVVRKYLACRGTEPTIRSCRLDN
NFRSGCDLRLDAEVVCSGHTEARLVGGEHPCAGRLEVTWGTVCDAALDLATAHVVCRELQCGAVVSTPEG
ARFGRGSGPVWTEAFRCAGNESLLFHCPRGRGSQCGHGHDAGLRCSEFRMVNGSSSCEGRVEFQVQGSWA
PLCATHWDIADATVLCHQLNCGNAVAAPGGGHFGDGDAAIWPDAFHCEGTESYLWNCPVSTLGAPACAPG
NTASAVCSGLAHALRLREGQSRCDGRVEVSLDGVWGRVLDDAWDLRGAGVVCRQLGCRGAQQAYDAPAPS
RGSVQVALSRVRCLGTETRLTQCNVSATLQEPAGTSRDAGVVCSGEVGTASPMARRHGIPGALTLSLHRE
PQGAAGRGAGALHGGAWGTVCDDAWDLRDAHVVCRQLGCGRALSALGAAHFGAGAGRIWLDELGCQGHES
ALWQCPSAGWGRHDWRHKEDAGVFCSESVALRLRGGTCCCAGWLDVFYNGTWGAMCSNALKDLSLSIICK
QLGCGVWGVGLAGEQALPLCGHRDRLGGQHRVPQAAQLHSVAMPFPPMAPALLRPSRAGLSEDRPQAAGE
PLNCSSWLGCPEEGALRVRGGEDRCSGRVELWHAGSWGTVCDDGWDLADAEVVCRQLGCGRAVAALGAAA
FGPGSGPVWLDEVGCRGSEASLWGCPAERWGRGDRAHEEDAGVRCWEPGPGPPLPAAPFRTFWVVSVVLG
SLLGLLLLGLMAFLILPRVTQAMQRGLGRSEVSPGEAIYDVIGEMPPAGLYEEIMEAEAVLQDEEDGSVV
KVDTEAAVSGEVSNLLEGQSIRAEGGHSRPVSQGYDEAAFPLEEMTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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