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Report for CCDS43434.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43434.1 Public Homo sapiens 6 OR2J2 24 110 108 CCDS HistoryNCBI Gene:26707Re-query CCDS DB by CCDS ID:43434.1Re-query CCDS DB by GeneID:26707See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43434.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377167.3 ENSP00000366372.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377167.3Link to Ensembl Protein Viewer:ENSP00000366372.2Re-query CCDS DB by Nucleotide ID:ENST00000377167Re-query CCDS DB by Protein ID:ENSP00000366372
Original member Current member EBI ENST00000641417.1 ENSP00000493401.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641417.1Link to Ensembl Protein Viewer:ENSP00000493401.1Re-query CCDS DB by Nucleotide ID:ENST00000641417Re-query CCDS DB by Protein ID:ENSP00000493401
Original member Current member NCBI NM_030905.3 NP_112167.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030905.3Link to Protein Sequence:NP_112167.2Re-query CCDS DB by Nucleotide ID:NM_030905Re-query CCDS DB by Protein ID:NP_112167Link to BLAST:NP_112167.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112167.2 312 O76002 312 98.7179% 0 4

Chromosomal Locations for CCDS 43434.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 29173636 29174574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGATGATTAAAAAAAATGCAAGTTCGGAAGACTTCTTTATTCTACTTGGATTTTCTAATTGGCCTCAGC
TGGAAGTAGTTCTCTTTGTGGTTATCTTGATCTTCTACCTGATGACACTGACAGGAAACCTGTTCATCAT
CATCCTGTCATACGTGGACTCCCATCTCCACACACCAATGTACTTCTTCCTTTCAAACCTCTCATTTCTG
GATCTCTGCTACACCACCAGCTCTATCCCTCAGTTGCTGGTGAATCTCCGGGGCCCGGAAAAGACCATCT
CGTATGCTGGTTGCATGGTTCAACTTTACTTTGTTCTTGCACTGGGAATCACAGAGTGTGTCCTACTGGT
GGTGATGTCATATGATCGTTATGTAGCTGTGTGTAGACCTTTGCATTACACTGTCCTCATGCACCCTCGT
TTCTGCCACTTGTTGGTTGCGGCTTCTTGGGTAATTGGTTTTACTATCTCAGCACTTCATTCCTCCTTTA
CTTTCTGGGTACCCCTTTGTGGACATCGCCTAGTGGATCACTTCTTCTGTGAAGTTCCAGCACTTCTGCG
TTTATCATGTGTTGACACCCATGCAAATGAGCTGACCCTCATGGTCATGAGCTCCATTTTTGTTCTCATA
CCTCTCATTCTCATTCTCACTACCTATGGTGCCATTGCCCGGGCTGTACTGAGCATGCAATCAACCACTG
GGCTTCAGAAAGTGTTTAGGACATGTGGAGCCCATCTTATGGTTGTATCTCTCTTTTTCATTCCAGTCAT
GTGCATGTATCTCCAGCCACCATCAGAAAATTCTCCTGATCAGGGCAAGTTCATTGCCCTCTTTTATACT
GTTGTCACACCGAGTCTTAATCCTCTAATCTACACTCTCAGAAACAAGCATGTAAAAGGGGCAGCGAAGA
GACTATTGGGGTGGGAGTGGGGGAAGTGA

Translation (312 aa):
MMIKKNASSEDFFILLGFSNWPQLEVVLFVVILIFYLMTLTGNLFIIILSYVDSHLHTPMYFFLSNLSFL
DLCYTTSSIPQLLVNLRGPEKTISYAGCMVQLYFVLALGITECVLLVVMSYDRYVAVCRPLHYTVLMHPR
FCHLLVAASWVIGFTISALHSSFTFWVPLCGHRLVDHFFCEVPALLRLSCVDTHANELTLMVMSSIFVLI
PLILILTTYGAIARAVLSMQSTTGLQKVFRTCGAHLMVVSLFFIPVMCMYLQPPSENSPDQGKFIALFYT
VVTPSLNPLIYTLRNKHVKGAAKRLLGWEWGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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