NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS469.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
469.1 Public Homo sapiens 1 PPIH 24 110 108 CCDS HistoryNCBI Gene:10465Re-query CCDS DB by CCDS ID:469.1Re-query CCDS DB by GeneID:10465See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 469.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304979.8 ENSP00000306614.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304979.8Link to Ensembl Protein Viewer:ENSP00000306614.3Re-query CCDS DB by Nucleotide ID:ENST00000304979Re-query CCDS DB by Protein ID:ENSP00000306614
Original member Current member EBI ENST00000372550.6 ENSP00000361630.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372550.6Link to Ensembl Protein Viewer:ENSP00000361630.2Re-query CCDS DB by Nucleotide ID:ENST00000372550Re-query CCDS DB by Protein ID:ENSP00000361630
Original member Current member EBI ENST00000678333.1 ENSP00000503384.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678333.1Link to Ensembl Protein Viewer:ENSP00000503384.1Re-query CCDS DB by Nucleotide ID:ENST00000678333Re-query CCDS DB by Protein ID:ENSP00000503384
Original member Current member EBI ENST00000676675.1 ENSP00000503489.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676675.1Link to Ensembl Protein Viewer:ENSP00000503489.1Re-query CCDS DB by Nucleotide ID:ENST00000676675Re-query CCDS DB by Protein ID:ENSP00000503489
Original member Current member EBI ENST00000678803.1 ENSP00000503922.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678803.1Link to Ensembl Protein Viewer:ENSP00000503922.1Re-query CCDS DB by Nucleotide ID:ENST00000678803Re-query CCDS DB by Protein ID:ENSP00000503922
Original member Current member EBI ENST00000678038.1 ENSP00000504108.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678038.1Link to Ensembl Protein Viewer:ENSP00000504108.1Re-query CCDS DB by Nucleotide ID:ENST00000678038Re-query CCDS DB by Protein ID:ENSP00000504108
Original member Current member EBI ENST00000677900.1 ENSP00000504595.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677900.1Link to Ensembl Protein Viewer:ENSP00000504595.1Re-query CCDS DB by Nucleotide ID:ENST00000677900Re-query CCDS DB by Protein ID:ENSP00000504595
Original member Current member NCBI NM_006347.4 NP_006338.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006347.4Link to Protein Sequence:NP_006338.1Re-query CCDS DB by Nucleotide ID:NM_006347Re-query CCDS DB by Protein ID:NP_006338Link to BLAST:NP_006338.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006338.1 177 O43447-1 177 100% 0 0

Chromosomal Locations for CCDS 469.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 42658447 42658512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42658844 42658908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42659228 42659251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42659522 42659566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42660862 42660904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42664863 42664955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42665980 42666067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42666547 42666587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 42667351 42667419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (534 nt):
ATGGCGGTGGCAAATTCAAGTCCTGTTAACCCCGTGGTGTTCTTTGATGTCAGTATTGGCGGTCAGGAAG
TTGGCCGCATGAAGATCGAGCTCTTTGCAGACGTTGTGCCTAAGACGGCCGAGAACTTTAGGCAGTTCTG
CACCGGAGAATTCAGGAAAGATGGGGTTCCAATAGGATACAAAGGAAGCACCTTCCACAGGGTCATAAAG
GATTTCATGATTCAGGGTGGAGATTTTGTTAATGGAGATGGTACTGGAGTCGCCAGTATTTACCGGGGGC
CATTTGCAGATGAAAATTTTAAACTTAGACACTCAGCTCCAGGCCTGCTTTCCATGGCGAACAGTGGTCC
AAGTACAAATGGCTGTCAGTTCTTTATCACCTGCTCTAAGTGCGATTGGCTGGATGGGAAGCATGTGGTG
TTTGGAAAAATCATCGATGGACTTCTAGTGATGAGAAAGATTGAGAATGTTCCCACAGGCCCCAACAATA
AGCCCAAGCTACCTGTGGTGATCTCGCAGTGTGGGGAGATGTAG

Translation (177 aa):
MAVANSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIK
DFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVV
FGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH