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Report for CCDS41636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41636.1 Public Homo sapiens 11 ACCSL 24 110 108 CCDS HistoryNCBI Gene:390110Re-query CCDS DB by CCDS ID:41636.1Re-query CCDS DB by GeneID:390110See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41636.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378832.1 ENSP00000368109.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378832.1Link to Ensembl Protein Viewer:ENSP00000368109.1Re-query CCDS DB by Nucleotide ID:ENST00000378832Re-query CCDS DB by Protein ID:ENSP00000368109
Original member Current member NCBI NM_001031854.2 NP_001027025.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031854.2Link to Protein Sequence:NP_001027025.2Re-query CCDS DB by Nucleotide ID:NM_001031854Re-query CCDS DB by Protein ID:NP_001027025Link to BLAST:NP_001027025.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001027025.2 568 Q4AC99 568 100% 0 0

Chromosomal Locations for CCDS 41636.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 44048037 44048540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44050062 44050121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44050552 44050622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44051335 44051404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44051653 44051719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44052662 44052759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44052991 44053068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44053406 44053506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44055202 44055291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44056040 44056085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44056185 44056326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44058317 44058459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44058546 44058699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44059838 44059920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1707 nt):
ATGAGTCATCGGTCAGACACCCTTCCTGTGCCCTCTGGTCAGAGGAGAGGCCGGGTCCCCAGAGACCACA
GCATCTATACCCAGCTGTTGGAGATAACGCTGCACTTGCAGCAGGCCATGACGGAGCACTTCGTGCAGCT
GACGAGCAGACAGGGCCTGTCGCTGGAGGAAAGGAGGCACACTGAGGCCATCTGTGAGCATGAAGCCCTT
CTGAGTCGCTTAATATGCCGGATGATCAACCTCCTACAGTCTGGGGCCGCGAGTGGCCTGGAGCTCCAAG
TGCCTCTTCCTTCTGAGGACTCTAGGGGTGATGTCAGATATGGGCAGAGGGCCCAACTCTCTGGGCAGCC
TGATCCAGTTCCCCAACTGAGTGATTGTGAAGCTGCCTTTGTCAACCGCGACCTATCCATCCGTGGGATT
GACATCTCTGTCTTTTATCAGTCGAGCTTCCAGGACTACAATGCCTACCAAAAAGATAAATATCATAAGG
ACAAGAACACCTTGGGTTTCATTAACCTTGGCACCAGTGAGAACAAGCTCTGCATGGATCTGATGACTGA
AAGATTGCAAGAAAGTGACATGAACTGCATTGAGGACACCTTGCTTCAGTACCCTGATTGGAGAGGGCAG
CCATTCCTGCGGGAAGAAGTGGCCCGGTTCCTGACCTACTACTGCAGGGCACCTACCCGACTTGACCCAG
AAAATGTGGTGGTTCTAAATGGCTGCTGCTCTGTCTTCTGTGCCCTGGCCATGGTTCTGTGTGATCCAGG
CGAGGCCTTCCTGGTCCCTGCTCCCTTCTATGGTGGCTTTGCCTTTAGCTCCCGCCTGTATGCAAAGGTT
GAGTTGATTCCTGTCCACCTGGAGAGTGAGGTCACTGTTACAAACACCCATCCTTTCCAGCTCACTGTGG
ACAAGTTAGAGGAAGCCCTGCTTGAAGCTAGGCTTGAGGGGAAAAAGGTCCGAGGCCTTGTGCTAATCAA
CCCTCAGAATCCTCTGGGTGACATCTACTCCCCAGACTCACTGATGAAATACCTGGAATTTGCCAAGAGG
TATAACCTACATGTGATCATAGATGAGATTTACATGCTGTCTGTGTTTGATGAATCCATCACATTCCACA
GCATTCTGAGCATGAAAAGTTTGCCTGATAGCAACAGGACCCATGTGATCTGGGGTACCAGTAAGGATTT
TGGCATCTCTGGCTTCCGCTTTGGTGCTCTGTATACCCACAACAAGGAGGTGGCCTCTGCTGTGAGTGCC
TTTGGCTACCTCCACAGTATTTCTGGCATCACCCAGCACAAGCTGTGTCAACTGCTCCAGAACACAGAAT
GGATTGACAAAGTATACCTACCCACCAATTGCTACCGGCTCCGGGAAGCTCACAAGTACATCACTGCTGA
GCTGAAGGCATTGGAGATCCCTTTTCACAACCGCAGCTCTGGCCTCTATGTCTGGATCAACTTGAAAAAG
TACCTGGATCCCTGTACATTTGAAGAAGAACGGCTCCTCTATTGCCGCTTCCTGGACAACAAGCTATTGT
TATCCCGTGGCAAAACCTACATGTGTAAGGAGCCAGGCTGGTTCTGCCTCATCTTTGCAGATGAGCTCCC
CCGGCTAAAATTGGCTATGCGTCGGTTCTGTGATGTGCTGCAGGAGCAGAAGGAGGCTTTGATAGTGAAG
CAGTTGGAGGATGCAATGAGGGAGTAG

Translation (568 aa):
MSHRSDTLPVPSGQRRGRVPRDHSIYTQLLEITLHLQQAMTEHFVQLTSRQGLSLEERRHTEAICEHEAL
LSRLICRMINLLQSGAASGLELQVPLPSEDSRGDVRYGQRAQLSGQPDPVPQLSDCEAAFVNRDLSIRGI
DISVFYQSSFQDYNAYQKDKYHKDKNTLGFINLGTSENKLCMDLMTERLQESDMNCIEDTLLQYPDWRGQ
PFLREEVARFLTYYCRAPTRLDPENVVVLNGCCSVFCALAMVLCDPGEAFLVPAPFYGGFAFSSRLYAKV
ELIPVHLESEVTVTNTHPFQLTVDKLEEALLEARLEGKKVRGLVLINPQNPLGDIYSPDSLMKYLEFAKR
YNLHVIIDEIYMLSVFDESITFHSILSMKSLPDSNRTHVIWGTSKDFGISGFRFGALYTHNKEVASAVSA
FGYLHSISGITQHKLCQLLQNTEWIDKVYLPTNCYRLREAHKYITAELKALEIPFHNRSSGLYVWINLKK
YLDPCTFEEERLLYCRFLDNKLLLSRGKTYMCKEPGWFCLIFADELPRLKLAMRRFCDVLQEQKEALIVK
QLEDAMRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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