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Report for CCDS53852.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53852.1 Public Homo sapiens 12 ZNF268 24 110 108 CCDS HistoryNCBI Gene:10795Re-query CCDS DB by CCDS ID:53852.1Re-query CCDS DB by GeneID:10795See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53852.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000592241.5 ENSP00000467922.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000592241.5Link to Ensembl Protein Viewer:ENSP00000467922.1Re-query CCDS DB by Nucleotide ID:ENST00000592241Re-query CCDS DB by Protein ID:ENSP00000467922
Original member Current member NCBI NM_001165887.2 NP_001159359.1 Accepted alive Link to Nucleotide Sequence:NM_001165887.2Link to Protein Sequence:NP_001159359.1Re-query CCDS DB by Nucleotide ID:NM_001165887Re-query CCDS DB by Protein ID:NP_001159359Link to BLAST:NP_001159359.1

Chromosomal Locations for CCDS 53852.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 133181998 133182030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133191489 133191615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133191908 133192003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133193428 133193533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 133202144 133202162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (381 nt):
ATGGCCACCAGGGTCCGGACAGCTTCTATTTGGGGACCTTTGTCATTCATGGATGTGTTTGTGGATTTTA
CCTGGGAGGAGTGGCAGCTGCTAGACCCAGCACAGAAGTGCCTGTACAGGAGTGTGATGTTGGAGAACTA
TAGCAACCTGGTGTCCCTAGGGTACCAACACACCAAACCTGATATCATCTTCAAGTTGGAACAAGGAGAA
GAGCTGTGTATGGTGCAGGCCCAAGTTCCAAATCAGACCTGTCCAATTTTGAAGGCTGGAAAGTCCAAAG
CCAAGGTGCTGGCAGGTTTGGTGTCTGGTGAGGGCCTGCTCTGTGCTTCCAAGATGACGCCTTGTTGCTG
CATCCTCTGGAGACACAGTCTGGAAAATTGA

Translation (126 aa):
MATRVRTASIWGPLSFMDVFVDFTWEEWQLLDPAQKCLYRSVMLENYSNLVSLGYQHTKPDIIFKLEQGE
ELCMVQAQVPNQTCPILKAGKSKAKVLAGLVSGEGLLCASKMTPCCCILWRHSLEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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