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Report for CCDS58003.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58003.1 Public Homo sapiens 1 FGGY 24 110 108 CCDS HistoryNCBI Gene:55277Re-query CCDS DB by CCDS ID:58003.1Re-query CCDS DB by GeneID:55277See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58003.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371212.5 ENSP00000360256.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371212.5Link to Ensembl Protein Viewer:ENSP00000360256.1Re-query CCDS DB by Nucleotide ID:ENST00000371212Re-query CCDS DB by Protein ID:ENSP00000360256
Original member Current member EBI ENST00000635156.1 ENSP00000489417.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000635156.1Link to Ensembl Protein Viewer:ENSP00000489417.1Re-query CCDS DB by Nucleotide ID:ENST00000635156Re-query CCDS DB by Protein ID:ENSP00000489417
Original member Current member NCBI NM_001244714.2 NP_001231643.1 Accepted alive Link to Nucleotide Sequence:NM_001244714.2Link to Protein Sequence:NP_001231643.1Re-query CCDS DB by Nucleotide ID:NM_001244714Re-query CCDS DB by Protein ID:NP_001231643Link to BLAST:NP_001231643.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231643.1 463 Q96C11-5 463 100% 0 0

Chromosomal Locations for CCDS 58003.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 59321550 59321750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59378749 59378837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59456961 59457076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59512311 59512439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59554124 59554227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59607803 59607910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59625988 59626049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59638228 59638375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59660219 59660293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59667283 59667403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59674039 59674133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59757931 59757992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59762503 59762584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGTCTGGTGGAGAACAGAAACCAGAGAGGTACTATGTGGGTGTGGACGTTGGAACAGGCAGTGTCCGTG
CAGCTCTGGTGGACCAGAGTGGGGTCCTGTTGGCTTTTGCAGACCAGCCAATTAAGAATTGGGAGCCCCA
GTTCAACCACCATGAGCAGTCCTCCGAGGACATCTGGGCTGCGTGCTGTGTTGTCACAAAGAACTTGAGA
GAGATTTGCTGGGATAAGGCGGGACATTTCTTTGATCTCCCGGACTTCTTATCGTGGAAGGCAACAGGTG
TCACAGCACGGTCTCTCTGCTCCCTGGTGTGTAAGTGGACATATTCAGCAGAGAAAGGCTGGGACGACAG
TTTCTGGAAAATGATTGGTTTGGAAGACTTTGTTGCAGATAATTACAGCAAAATAGGAAACCAAGTGCTA
CCTCCTGGAGCTTCTCTTGGAAATGGGCTCACACCAGAGGCAGCAAGAGACCTTGGCCTTCTCCCTGGGA
TTGCGGTCGCAGCTTCACTCATTGATGCCCATGCAGGAGGACTAGGAGTGATTGGGGCAGATGTGAGAGG
GCACGGCCTCATCTGTGAGGGGCAGCCAGTGACGTCACGGCTGGCTGTCATCTGTGGAACGTCTTCTTGT
CACATGGGGATCAGCAAAGACCCGATTTTTGTACCAGGCGTCTGGGGGCCTTATTTCTCAGCCATGGTAC
CTGGGTTCTGGCTGAATGAAGGTGGTCAGAGCGTTACTGGAAAATTGATAGACCACATGGTACAAGGCCA
TGCTGCTTTTCCAGAACTACAAGTAAAGGCCACAGCCAGATGCCAGAGTATATATGCATATTTGAACAGT
CACCTGGATCTGATTAAGAAGGCTCAGCCTGTGGGTTTCCTTACTGTTGATTTACATGTTTGGCCAGATT
TCCATGGCAACCGGTCTCCCTTAGCAGATCTGACACTAAAGGGCATGGTCACCGGATTGAAACTGTCTCA
GGACCTTGATGATCTTGCCATTCTCTACCTGGCCACAGTTCAAGCCATTGCTTTGGGGACTCGCTTCATT
ATAGAAGCCATGGAGGCAGCAGGGCACTCAATCAGTACTCTTTTCCTATGTGGAGGCCTCAGCAAGAATC
CCCTTTTTGTGCAAATGCATGCGGACATTACTGGCATGCCTGTGGTCCTGTCGCAAGAGGTGGAGTCCGT
TCTTGTGGGTGCTGCTGTTCTGGGTGCCTGTGCCTCAGGGGATTTCGCTTCTGTACAGGAAGCAATGGCA
AAAATGAGCAAAGTTGGGAAAGTTGTGTTCCCGAGACTACAGGATAAAAAATACTATGATAAGAAATACC
AAGTATTCCTGAAGCTGGTTGAACACCAGAAGGAGTATTTGGCGATCATGAATGATGACTGA

Translation (463 aa):
MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKNWEPQFNHHEQSSEDIWAACCVVTKNLR
EICWDKAGHFFDLPDFLSWKATGVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVL
PPGASLGNGLTPEAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSC
HMGISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQSIYAYLNS
HLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDLAILYLATVQAIALGTRFI
IEAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMA
KMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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