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Report for CCDS15128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15128.1 Public Mus musculus 1 Ecel1 23 108 98 CCDS HistoryNCBI Gene:13599Re-query CCDS DB by CCDS ID:15128.1Re-query CCDS DB by GeneID:13599See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15128.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027463.10 ENSMUSP00000027463.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027463.10Link to Ensembl Protein Viewer:ENSMUSP00000027463.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000027463Re-query CCDS DB by Protein ID:ENSMUSP00000027463
Original member Current member EBI ENSMUST00000161002.7 ENSMUSP00000125096.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161002.7Link to Ensembl Protein Viewer:ENSMUSP00000125096.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161002Re-query CCDS DB by Protein ID:ENSMUSP00000125096
Original member Current member EBI ENSMUST00000160810.1 ENSMUSP00000125557.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000160810.1Link to Ensembl Protein Viewer:ENSMUSP00000125557.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000160810Re-query CCDS DB by Protein ID:ENSMUSP00000125557
Original member NCBI NM_001277925.1 NP_001264854.1 Updated not alive Link to Nucleotide Sequence:NM_001277925.1Link to Protein Sequence:NP_001264854.1Re-query CCDS DB by Nucleotide ID:NM_001277925Re-query CCDS DB by Protein ID:NP_001264854
Current member NCBI NM_001277925.2 NP_001264854.1 Accepted alive Link to Nucleotide Sequence:NM_001277925.2Link to Protein Sequence:NP_001264854.1Re-query CCDS DB by Nucleotide ID:NM_001277925Re-query CCDS DB by Protein ID:NP_001264854Link to BLAST:NP_001264854.1
Original member NCBI NM_021306.3 NP_067281.2 Updated not alive Link to Nucleotide Sequence:NM_021306.3Link to Protein Sequence:NP_067281.2Re-query CCDS DB by Nucleotide ID:NM_021306Re-query CCDS DB by Protein ID:NP_067281
Current member NCBI NM_021306.4 NP_067281.2 Accepted alive Link to Nucleotide Sequence:NM_021306.4Link to Protein Sequence:NP_067281.2Re-query CCDS DB by Nucleotide ID:NM_021306Re-query CCDS DB by Protein ID:NP_067281Link to BLAST:NP_067281.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001264854.1 775 Q9JMI0 775 100% 0 0
NP_067281.2 775 Q9JMI0 775 100% 0 0

Chromosomal Locations for CCDS 15128.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 87147987 87148086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87148226 87148302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87148625 87148720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87149134 87149199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87149496 87149620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87149784 87149851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87150477 87150528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87150606 87150664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87150900 87151003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87151135 87151209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87151449 87151547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87151983 87152205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87152819 87152943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87153120 87153212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87153301 87153411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87153518 87153586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 87154204 87154989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2328 nt):
ATGGAGGCCCCGTATTCCATGACAGCGCACTACGACGAGTTCCAGGAAGTCAAGTATGTGAGCCGGTGTG
GCACCGGGGGCGCTCGAGGGACCTCACTGCCTCCAGGCTTCCCGAGGGGCTCAGGGCGCAGTGCTAGCGG
GTCCAGGTCTGGGCTGCCCCGCTGGAATCGACGCGAGGTGTGCCTGCTGTCGGGGTTGGTGTTTGCTGCC
GGCCTCTGCGCCATCCTGGCGGCCATGCTGGCGCTCAAATACCTGGGCCCGGGAGCGGCGGGCGGTGGCG
GAGCCTGTCCCGAGGGCTGCCCCGAGCGCAAGGCCTTTGCACGCGCCGCCCGCTTTCTGTCTGCCAACCT
GGACGCCAGCATCGACCCGTGCCAGGACTTCTACTCGTTCGCGTGCGGAGGCTGGCTGCGGCGCCACGCT
ATCCCCGACGACAAGCTCACCTACGGCACGATCGCGGCCATCGGAGAGCAGAACGAGGAGCGTCTGCGGC
GCCTGCTGGCGAGACCCACCGGAGGCCCCGGCGGCGCTGCGCAGCGCAAGGTGCGCGCCTTCTTCCGCTC
GTGCCTCGACATGCGCGAGATCGAGAGGCTCGGGCCGCGGCCCATGCTCGAGGTCATCGAGGACTGCGGC
GGCTGGGACCTGGGCGGCGCGGCCGATCGCCCCGGGGCGGCTCGCTGGGACCTCAACCGACTGCTGTACA
AGGCACAGGGTGTGTACAGCGCGGCCGCGCTCTTCTCGCTTACAGTCAGCCTGGACGACAGGAACTCCTC
GCGCTACGTCATCCGCATTGACCAGGATGGGCTCACCCTGCCAGAGAGAACCCTGTACCTAGCTCAAGAC
GAGGAGAGTGAGAAGATCTTGGCTGCATACAGGGTGTTCATGCAGCGTCTACTCAGACTACTGGGAGCGG
ACGCTGTGGAGCAGAAGGCGCAGGAAATCCTTCAGCTGGAACAGAGGCTGGCCAATATCTCTGTGTCAGA
ATATGATGATCTCCGTCGTGATGTCAGCTCCGCGTACAACAAAGTGACTCTGGGGCAGCTGCAGAAGATC
ATCCCCCATTTGCAGTGGAAGTGGCTGCTGGATCAGATCTTCCAGGAAGACTTCTCGGAGGAGGAGGAGG
TGGTGCTGCTGGCCACAGACTACATGCAGCAGGTGTCCCAGCTCATCCGCTCCACACCTCGAAGGATCCT
GCACAACTACCTAGTGTGGCGTGTGGTGGTGGTTCTGAGTGAGCACCTGTCCTCACCATTCCGAGAGGCA
CTGCATGAGCTGGCCAAAGAGATGGAGGGCAATGACAAGCCCCAGGAGTTGGCCCGAGTCTGCCTGGGCC
AGGCCAACCGCCACTTCGGCATGGCTCTTGGTGCCCTCTTTGTACATGAACACTTCTCAGCTGCCAGTAA
AGCCAAGGTGCAGCAGCTAGTGGAAGATATCAAGTACATCTTGGGCCAGCGCCTGGAGGAGCTGGACTGG
ATGGATGCCCAGACCAAGGCAGCTGCTCGGGCCAAGCTCCAGTACATGATGGTCATGGTTGGCTATCCAG
ACTTCCTGCTGAAACCTGAGGCTGTAGACAAAGAATATGAGTTCGAGGTCCACGAGAAGACCTACTTCAA
GAACATTTTGAACAGCATCCGATTCAGTATCCAGTTGTCCGTCAAAAAGATTCGACAGGAGGTGGACAAA
TCCTCGTGGCTCCTCCCACCACAGGCGCTCAATGCCTACTATCTGCCCAACAAGAATCAAATGGTCTTCC
CAGCTGGCATCCTGCAGCCCACCCTGTATGACCCAGACTTCCCACAGTCTCTGAACTACGGGGGTATTGG
CACCATCATTGGGCACGAACTGACCCATGGCTATGACGACTGGGGGGGACAGTATGACCGCTCAGGAAAC
CTGTTGCACTGGTGGACTGAGACCTCCTACAGCCACTTTCTGCGCAAGGCCGAGTGCATCGTTCGCCTCT
ATGACAACTTCACCGTCTACAACCAGCGCGTGAATGGGAAACACACACTTGGCGAGAACATCGCAGACAT
GGGAGGCCTCAAGCTGGCCTACTATGCCTATCAGAAGTGGGTCCGGGAGCATGGCCCGGAGCACCCGCTG
CACCGGCTCAAGTACACACACAACCAGCTTTTCTTCATTGCCTTTGCACAGAACTGGTGCATCAAGCGAC
GGTCACAGTCCATCTACCTGCAGGTGCTGACAGACAAGCATGCACCTGAGCACTACCGGGTCCTGGGCAG
CGTATCCCAGTTTGAGGAATTCGGCCGGGCCTTCCACTGTCCCAAGGACTCTCCCATGAACCCCGTCCAT
AAGTGCTCTGTGTGGTGA

Translation (775 aa):
MEAPYSMTAHYDEFQEVKYVSRCGTGGARGTSLPPGFPRGSGRSASGSRSGLPRWNRREVCLLSGLVFAA
GLCAILAAMLALKYLGPGAAGGGGACPEGCPERKAFARAARFLSANLDASIDPCQDFYSFACGGWLRRHA
IPDDKLTYGTIAAIGEQNEERLRRLLARPTGGPGGAAQRKVRAFFRSCLDMREIERLGPRPMLEVIEDCG
GWDLGGAADRPGAARWDLNRLLYKAQGVYSAAALFSLTVSLDDRNSSRYVIRIDQDGLTLPERTLYLAQD
EESEKILAAYRVFMQRLLRLLGADAVEQKAQEILQLEQRLANISVSEYDDLRRDVSSAYNKVTLGQLQKI
IPHLQWKWLLDQIFQEDFSEEEEVVLLATDYMQQVSQLIRSTPRRILHNYLVWRVVVVLSEHLSSPFREA
LHELAKEMEGNDKPQELARVCLGQANRHFGMALGALFVHEHFSAASKAKVQQLVEDIKYILGQRLEELDW
MDAQTKAAARAKLQYMMVMVGYPDFLLKPEAVDKEYEFEVHEKTYFKNILNSIRFSIQLSVKKIRQEVDK
SSWLLPPQALNAYYLPNKNQMVFPAGILQPTLYDPDFPQSLNYGGIGTIIGHELTHGYDDWGGQYDRSGN
LLHWWTETSYSHFLRKAECIVRLYDNFTVYNQRVNGKHTLGENIADMGGLKLAYYAYQKWVREHGPEHPL
HRLKYTHNQLFFIAFAQNWCIKRRSQSIYLQVLTDKHAPEHYRVLGSVSQFEEFGRAFHCPKDSPMNPVH
KCSVW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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