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Report for CCDS60520.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60520.1 Public Homo sapiens 10 ZFAND4 24 110 108 CCDS HistoryNCBI Gene:93550Re-query CCDS DB by CCDS ID:60520.1Re-query CCDS DB by GeneID:93550See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 60520.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374366.7 ENSP00000363486.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374366.7Link to Ensembl Protein Viewer:ENSP00000363486.3Re-query CCDS DB by Nucleotide ID:ENST00000374366Re-query CCDS DB by Protein ID:ENSP00000363486
Original member Current member NCBI NM_001282905.1 NP_001269834.1 Accepted alive Link to Nucleotide Sequence:NM_001282905.1Link to Protein Sequence:NP_001269834.1Re-query CCDS DB by Nucleotide ID:NM_001282905Re-query CCDS DB by Protein ID:NP_001269834Link to BLAST:NP_001269834.1
Original member Current member NCBI NM_001282906.1 NP_001269835.1 Accepted alive Link to Nucleotide Sequence:NM_001282906.1Link to Protein Sequence:NP_001269835.1Re-query CCDS DB by Nucleotide ID:NM_001282906Re-query CCDS DB by Protein ID:NP_001269835Link to BLAST:NP_001269835.1

Chromosomal Locations for CCDS 60520.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 45616436 45616571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45618140 45618260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45624583 45624637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45625951 45627105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45639816 45639963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45648294 45648534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45651966 45652033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 45652984 45653021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1962 nt):
ATGGAACTTGAAAATGATTATTGCTTGAATGATTACAACATTTCAGAAGGGTGTACCTTGAAGCTAGTTT
TGGCTATGCGTGGCGGACCTATAAATACTAGAAGAGTTCCTACAGACGATCCACTTAGGAAGATGGCAGA
GTACTTGGATTCCAGTCGAGTTGAGGTCTGGGAGAAGACCTCCTGCAGCAAACAAGTTACATTTTTGGTA
TACCAAGAAGGAGATCAATTGAATTTCTTTCCTGCAGTAGATAGGGGAGATGGCACTTTAACACCGTTAT
CTGACTCTTCAAAGAAAATAGATTTTCATTTGCATGTCCTACGGAGAAAAGGAGAACATCGTATGAGTGG
TGGTTCTATGTATAATTCAGATACAGATGAGGATGAAGAAACTGAGCCTTCTTCTTCTGGGCAACAGATA
ATTGAAAATTCAATAACTATGAATAAGATGAAGCTGCTGAAGGCTAAGATGAAGAACATGAATCTCAGCA
AAAAGCCTAAGAAAGCTGTCAAGATAAAACCTCACCCACCTGTAGCTCCTCGACCTTCTAGTGGTTCCAC
TGCACCATCTCGCCACCGATTGTTAAGGGTCCTCCCCAACATTGGTCAATCTTGTTCACCTGCTTTTGGG
AATGCATATCCGCCCGAAATCTCCAGGAATGGAATTTCAAGTTTGGCAACTCAACTCTCTGCTGAGAGAT
ACATATCTTCTATCACTGGTGAATTTCTTAAGGAAGATAATAGCTGGGAGAATAACACACTGTCTCACTT
CAGTAGCAACGTCAAACTACCTCCTCAGATACCCCATTTGGAGTTGGGAAATGACCAGGAGCTTGCTGAC
TCTGTTCTCCATCTTGGATCATCCCTGCCTAGGCAAACAAAACATTTTTTAGGAAACTTGCCATCTAGTA
ATGGGAACATTGTCTTACCTTCAGAAGAATGTGTAACCGAACAATCACTTCTACCTAAAGTGGGCTCACT
GGCTTCATTTGCAGAAGGAAATGCTGATGAACAGAGCAGCGGCTTAGAAGGTGCGTGCAAAGTGAATCTG
GAGTTGCTACTCACTAATGCTGACAAAGGGTTGAAAGCTCCAGAGCAGCATCTCAAGCATGTTGCAGGAG
TGCTGAATGGGGAATCAGTAGAGACTTCAGTTCTTAACTACCGGGAATTAAGTCCTCACAAGAATAGACT
CTTGTCACCTCTTCGCTGTTCTGCACCAATGTCGCTACATAATTCTCTGGTGAAACCAGAGAGACAGTCC
AAATGTTTTGAGTTTGGGAAGCTACAGCCTTCTTCTTCTCAGTCACTGGATGTTCAAAACATAACTGATT
CTTCTTTCTCTAGGACTACTTGCTTTCAAGGTGTTAAAGTTGATTCACTTGGGAAAAGATCTGATGTTAT
TTCCAAAGTTGAGGCTCGGGATATCACAGAAATGACTAACAAGGCTTCCAAAGAGCCTGTTGGTTGTGTA
AATAATATCAGTTTTCTTGCCTCACTGGCCGGGAGCACAAGCAGAAATAGATTACAGAGCACACGTGGGG
CAGGCAGGCTTCAGAACTCTGGAACTGGGCTGTCTACAAACCTCCAGCATTTTCAGGAAGAAAACTTTAG
GAAAAGTTCTCCCCAGTTAGAACATACAGGAGTTTTTTTGTCTACCCATGGTGTTGGAATGAATGGAAAT
AATGCAGCAGCAGGGAAAAGCGTAGGAGAATGTACTACTCATCACCTCCCACCTGTGAAAGCCCCTCTTC
AGACAAAGAAGAAAACAACAAATCATTGTTTTCTTTGTGGAAAGAAAACAGGACTGGCTAGTAGCTACGA
ATGCAGATGTGGAAACAACTTCTGTGCATCTCATCGTTATGCAGAAACTCATGGCTGTACCTATGATTAC
AAGAGTGCAGGGAGGAGATACTTGCACGAGGCAAATCCTGTGGTTAATGCACCAAAGCTTCCAAAAATCT
AA

Translation (653 aa):
MELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMAEYLDSSRVEVWEKTSCSKQVTFLV
YQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHVLRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQI
IENSITMNKMKLLKAKMKNMNLSKKPKKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFG
NAYPPEISRNGISSLATQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELAD
SVLHLGSSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGACKVNL
ELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAPMSLHNSLVKPERQS
KCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDVISKVEARDITEMTNKASKEPVGCV
NNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLSTNLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGN
NAAAGKSVGECTTHHLPPVKAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDY
KSAGRRYLHEANPVVNAPKLPKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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