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Report for CCDS10848.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10848.1 Public Homo sapiens 16 NUTF2 24 110 108 CCDS HistoryNCBI Gene:10204Re-query CCDS DB by CCDS ID:10848.1Re-query CCDS DB by GeneID:10204See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10848.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000219169.9 ENSP00000219169.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000219169.9Link to Ensembl Protein Viewer:ENSP00000219169.4Re-query CCDS DB by Nucleotide ID:ENST00000219169Re-query CCDS DB by Protein ID:ENSP00000219169
Original member Current member EBI ENST00000568396.2 ENSP00000457022.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000568396.2Link to Ensembl Protein Viewer:ENSP00000457022.1Re-query CCDS DB by Nucleotide ID:ENST00000568396Re-query CCDS DB by Protein ID:ENSP00000457022
Original member Current member EBI ENST00000569436.7 ENSP00000457989.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569436.7Link to Ensembl Protein Viewer:ENSP00000457989.1Re-query CCDS DB by Nucleotide ID:ENST00000569436Re-query CCDS DB by Protein ID:ENSP00000457989
Original member Current member EBI ENST00000700613.1 ENSP00000515103.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700613.1Link to Ensembl Protein Viewer:ENSP00000515103.1Re-query CCDS DB by Nucleotide ID:ENST00000700613Re-query CCDS DB by Protein ID:ENSP00000515103
Original member Current member EBI ENST00000700614.1 ENSP00000515104.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000700614.1Link to Ensembl Protein Viewer:ENSP00000515104.1Re-query CCDS DB by Nucleotide ID:ENST00000700614Re-query CCDS DB by Protein ID:ENSP00000515104
Original member Current member NCBI NM_001322038.2 NP_001308967.1 Accepted alive Link to Nucleotide Sequence:NM_001322038.2Link to Protein Sequence:NP_001308967.1Re-query CCDS DB by Nucleotide ID:NM_001322038Re-query CCDS DB by Protein ID:NP_001308967Link to BLAST:NP_001308967.1
Original member Current member NCBI NM_001322039.2 NP_001308968.1 Accepted alive Link to Nucleotide Sequence:NM_001322039.2Link to Protein Sequence:NP_001308968.1Re-query CCDS DB by Nucleotide ID:NM_001322039Re-query CCDS DB by Protein ID:NP_001308968Link to BLAST:NP_001308968.1
Original member Current member NCBI NM_001322040.2 NP_001308969.1 Accepted alive Link to Nucleotide Sequence:NM_001322040.2Link to Protein Sequence:NP_001308969.1Re-query CCDS DB by Nucleotide ID:NM_001322040Re-query CCDS DB by Protein ID:NP_001308969Link to BLAST:NP_001308969.1
Original member Current member NCBI NM_001322041.2 NP_001308970.1 Accepted alive Link to Nucleotide Sequence:NM_001322041.2Link to Protein Sequence:NP_001308970.1Re-query CCDS DB by Nucleotide ID:NM_001322041Re-query CCDS DB by Protein ID:NP_001308970Link to BLAST:NP_001308970.1
Original member Current member NCBI NM_005796.3 NP_005787.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005796.3Link to Protein Sequence:NP_005787.1Re-query CCDS DB by Nucleotide ID:NM_005796Re-query CCDS DB by Protein ID:NP_005787Link to BLAST:NP_005787.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308967.1 127 P61970 127 100% 0 0
NP_001308968.1 127 P61970 127 100% 0 0
NP_001308969.1 127 P61970 127 100% 0 0
NP_001308970.1 127 P61970 127 100% 0 0
NP_005787.1 127 P61970 127 100% 0 0

Chromosomal Locations for CCDS 10848.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67865131 67865229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67868340 67868411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67868501 67868599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67870800 67870913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (384 nt):
ATGGGAGACAAGCCAATTTGGGAGCAGATTGGATCCAGCTTCATTCAACATTACTACCAGTTATTTGATA
ATGATAGAACCCAACTAGGCGCAATTTACATTGACGCGTCATGCCTTACGTGGGAAGGACAACAGTTCCA
GGGGAAAGCTGCCATTGTGGAGAAGTTGTCTAGCCTTCCGTTCCAGAAAATTCAGCACAGCATCACCGCG
CAGGACCATCAGCCCACTCCAGATAGCTGCATCATCAGCATGGTTGTGGGCCAGCTTAAGGCGGATGAAG
ACCCCATCATGGGGTTCCACCAGATGTTCCTATTAAAGAACATCAACGATGCTTGGGTTTGCACCAATGA
CATGTTCAGGCTCGCCCTGCACAACTTTGGCTGA

Translation (127 aa):
MGDKPIWEQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITA
QDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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