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Report for CCDS83315.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83315.1 Public Homo sapiens 8 SYBU 24 110 108 CCDS HistoryNCBI Gene:55638Re-query CCDS DB by CCDS ID:83315.1Re-query CCDS DB by GeneID:55638See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83315.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000529690.5 ENSP00000433941.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000529690.5Link to Ensembl Protein Viewer:ENSP00000433941.1Re-query CCDS DB by Nucleotide ID:ENST00000529690Re-query CCDS DB by Protein ID:ENSP00000433941
Original member Current member NCBI NM_001330596.2 NP_001317525.1 Accepted alive Link to Nucleotide Sequence:NM_001330596.2Link to Protein Sequence:NP_001317525.1Re-query CCDS DB by Nucleotide ID:NM_001330596Re-query CCDS DB by Protein ID:NP_001317525Link to BLAST:NP_001317525.1

Chromosomal Locations for CCDS 83315.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 109574906 109576013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109577868 109578017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109579799 109580002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109586060 109586162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109607911 109607947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1602 nt):
ATGTTTGCCATGAAAGTCTATGGAGCTTACCTTCTAAGTAGTGAAGCTGATTTTAGCTCCTCGAGCAGCA
CAGGCAGCATTTCCGCTCCTGAGGTCCATATGTCGACTGCGGGAAGCAAGCGGTCTTCTTCTTCACGCAA
TCGAGGTCCTCATGGGCGGAGTAATGGAGCTTCGTCACACAAGCCTGGCAGCAGCCCATCATCCCCGCGG
GAAAAGGACCTTCTGTCCATGCTGTGCAGGAATCAGCTGAGCCCTGTCAATATCCATCCCAGTTATGCAC
CTTCTTCCCCAAGCAGTAGCAACTCAGGCTCCTACAAAGGAAGCGACTGTAGCCCCATCATGAGGCGTTC
TGGAAGGTACATGTCTTGCGGTGAAAATCATGGTGTCAGACCCCCAAACCCAGAGCAGTATTTGACTCCA
CTGCAGCAGAAAGAGGTGACAGTGAGACACCTCAAAACCAAGCTGAAGGAATCTGAGCGCCGACTCCATG
AAAGGGAAAGTGAAATCGTGGAGCTTAAGTCCCAGCTGGCCCGCATGCGAGAGGACTGGATTGAGGAGGA
GTGTCACCGGGTAGAGGCCCAGTTGGCACTCAAAGAAGCCAGGAAAGAGATTAAACAGCTCAAACAGGTC
ATCGAAACCATGCGGAGCAGCTTGGCTGATAAAGATAAAGGCATTCAGAAATATTTTGTGGACATAAACA
TCCAAAACAAGAAGCTGGAGTCTCTCCTTCAGAGCATGGAGATGGCACACAGTGGCTCTCTGAGGGACGA
ACTGTGCCTAGACTTTCCATGTGATTCCCCAGAGAAGAGCTTAACCCTCAACCCCCCTCTTGACACAATG
GCAGATGGGTTATCTCTGGAAGAGCAGGTCACGGGGGAAGGGGCTGACAGGGAGCTACTGGTAGGAGATA
GCATAGCCAACAGCACAGATTTGTTCGATGAGATAGTGACAGCCACCACCACAGAATCTGGTGACCTGGA
GCTTGTGCATTCCACCCCTGGGGCTAACGTCCTGGAGCTGCTGCCCATAGTCATGGGTCAGGAGGAGGGC
AGTGTGGTGGTGGAGCGAGCCGTTCAGACCGACGTGGTGCCCTACAGCCCAGCCATCTCAGAGCTCATTC
AGAGTGTGCTGCAGAAGCTCCAGGACCCCTGTCCCTCGAGCTTGGCGTCCCCTGATGAGTCTGAACCAGA
CTCGATGGAGAGCTTCCCAGAGTCCCTCTCTGCCTTAGTGGTTGATTTAACTCCAAGAAATCCAAACTCA
GCCATCCTTTTGTCTCCCGTGGAGACCCCCTACGCCAATGTGGATGCAGAAGTTCATGCAAACCGCCTCA
TGAGAGAGCTGGATTTTGCAGCCTGCGTGGAAGAGAGGTTGGATGGTGTCATCCCACTGGCTCGCGGGGG
CGTCGTGAGGCAGTACTGGAGCAGCAGCTTCCTGGTGGATCTCCTGGCTGTGGCTGCCCCCGTGGTCCCC
ACGGTTCTGTGGGCATTCAGTACTCAGAGAGGGGGAACGGATCCTGTGTATAACATCGGGGCCTTGCTCA
GGGGCTGTTGCGTGGTTGCCCTGCATTCGCTCCGCCGCACCGCCTTCCGTATCAAAACCTAA

Translation (533 aa):
MFAMKVYGAYLLSSEADFSSSSSTGSISAPEVHMSTAGSKRSSSSRNRGPHGRSNGASSHKPGSSPSSPR
EKDLLSMLCRNQLSPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTP
LQQKEVTVRHLKTKLKESERRLHERESEIVELKSQLARMREDWIEEECHRVEAQLALKEARKEIKQLKQV
IETMRSSLADKDKGIQKYFVDINIQNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTM
ADGLSLEEQVTGEGADRELLVGDSIANSTDLFDEIVTATTTESGDLELVHSTPGANVLELLPIVMGQEEG
SVVVERAVQTDVVPYSPAISELIQSVLQKLQDPCPSSLASPDESEPDSMESFPESLSALVVDLTPRNPNS
AILLSPVETPYANVDAEVHANRLMRELDFAACVEERLDGVIPLARGGVVRQYWSSSFLVDLLAVAAPVVP
TVLWAFSTQRGGTDPVYNIGALLRGCCVVALHSLRRTAFRIKT


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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