NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS53993.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53993.1 Public Homo sapiens 16 COQ7 24 110 108 CCDS HistoryNCBI Gene:10229Re-query CCDS DB by CCDS ID:53993.1Re-query CCDS DB by GeneID:10229See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53993.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544894.6 ENSP00000442923.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544894.6Link to Ensembl Protein Viewer:ENSP00000442923.2Re-query CCDS DB by Nucleotide ID:ENST00000544894Re-query CCDS DB by Protein ID:ENSP00000442923
Original member Current member NCBI NM_001190983.2 NP_001177912.1 Accepted alive Link to Nucleotide Sequence:NM_001190983.2Link to Protein Sequence:NP_001177912.1Re-query CCDS DB by Nucleotide ID:NM_001190983Re-query CCDS DB by Protein ID:NP_001177912Link to BLAST:NP_001177912.1
Original member Current member NCBI NM_001370492.1 NP_001357421.1 Accepted alive Link to Nucleotide Sequence:NM_001370492.1Link to Protein Sequence:NP_001357421.1Re-query CCDS DB by Nucleotide ID:NM_001370492Re-query CCDS DB by Protein ID:NP_001357421Link to BLAST:NP_001357421.1
Original member Current member NCBI NM_001370493.1 NP_001357422.1 Accepted alive Link to Nucleotide Sequence:NM_001370493.1Link to Protein Sequence:NP_001357422.1Re-query CCDS DB by Nucleotide ID:NM_001370493Re-query CCDS DB by Protein ID:NP_001357422Link to BLAST:NP_001357422.1
Original member Current member NCBI NM_001370494.1 NP_001357423.1 Accepted alive Link to Nucleotide Sequence:NM_001370494.1Link to Protein Sequence:NP_001357423.1Re-query CCDS DB by Nucleotide ID:NM_001370494Re-query CCDS DB by Protein ID:NP_001357423Link to BLAST:NP_001357423.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177912.1 179 Q99807-2 179 100% 0 0
NP_001357421.1 179 Q99807-2 179 100% 0 0
NP_001357422.1 179 Q99807-2 179 100% 0 0
NP_001357423.1 179 Q99807-2 179 100% 0 0

Chromosomal Locations for CCDS 53993.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 19071969 19072106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19073921 19074035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19075721 19075860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19077306 19077374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19078081 19078158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGACTTTAGACAATATCAGTCGGGCAGCTGTGGATCGAATAATCCGGGTGGATCATGCAGGCGAATATG
GAGCAAACCGCATCTATGCCGGGCAGATGGCTGTCCTGGGTCGGACCAGCGTCGGGCCAGTCATTCAGAA
AATGTGGGATCAAGAAAAGGACCATTTGAAAAAGTTCAATGAGTTGATGGTTACGTTCAGGGTCCGGCCA
ACAGTTCTGATGCCCTTGTGGAACGTGCTGGGGTTTGCACTGGGGGCGGGGACCGCCTTGCTCGGGAAGG
AAGGTGCCATGGCCTGCACCGTGGCGGTGGAAGAGAGCATAGCACATCACTACAACAACCAGATCAGGAC
GCTGATGGAGGAGGACCCTGAAAAATACGAGGAACTTCTTCAGCTGATAAAGAAATTTCGGGATGAAGAG
CTTGAGCACCATGACATAGGCCTCGACCATGATGCAGAATTGGCTCCAGCCTATGCCGTCCTGAAGAGCA
TTATCCAGGCCGGATGCAGAGTGGCGATATATTTATCAGAAAGATTATAA

Translation (179 aa):
MTLDNISRAAVDRIIRVDHAGEYGANRIYAGQMAVLGRTSVGPVIQKMWDQEKDHLKKFNELMVTFRVRP
TVLMPLWNVLGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIRTLMEEDPEKYEELLQLIKKFRDEE
LEHHDIGLDHDAELAPAYAVLKSIIQAGCRVAIYLSERL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH