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Report for CCDS3510.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3510.1 Public Homo sapiens 4 NOA1 24 110 108 CCDS HistoryNCBI Gene:84273Re-query CCDS DB by CCDS ID:3510.1Re-query CCDS DB by GeneID:84273See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3510.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264230.5 ENSP00000264230.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264230.5Link to Ensembl Protein Viewer:ENSP00000264230.4Re-query CCDS DB by Nucleotide ID:ENST00000264230Re-query CCDS DB by Protein ID:ENSP00000264230
Original member Current member NCBI NM_032313.4 NP_115689.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032313.4Link to Protein Sequence:NP_115689.1Re-query CCDS DB by Nucleotide ID:NM_032313Re-query CCDS DB by Protein ID:NP_115689Link to BLAST:NP_115689.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115689.1 698 Q8NC60 698 100% 0 0

Chromosomal Locations for CCDS 3510.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 56963450 56963661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56964406 56964526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56966620 56966736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56968384 56968515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56973148 56973353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56973858 56974022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 56976442 56977585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2097 nt):
ATGCTGCCCGCTCGCCTACCGTTCAGGCTGCTGAGCCTTTTCCTTCGTGGATCCGCTCCCACGGCAGCGC
GCCATGGCCTCCGGGAGCCGCTCCTGGAGAGGAGGTGCGCTGCCGCCTCCTCCTTCCAGCACTCATCGAG
TCTGGGACGCGAGCTTCCTTATGACCCCGTGGACACGGAGGGCTTTGGAGAAGGTGGTGACATGCAGGAG
CGTTTTCTGTTCCCGGAGTACATCCTGGATCCGGAGCCGCAACCCACCCGCGAAAAGCAGCTGCAGGAGC
TCCAGCAACAGCAGGAGGAGGAGGAGCGACAGAGGCAGCAGCGGCGGGAGGAGCGGCGACAGCAAAACCT
ACGGGCCAGGTCCCGGGAGCACCCGGTCGTGGGGCACCCGGACCCGGCATTGCCGCCCAGCGGCGTGAAC
TGCTCGGGCTGTGGGGCAGAGCTGCACTGCCAGGACGCCGGAGTGCCCGGCTACCTGCCCCGAGAGAAGT
TCCTCCGCACGGCGGAGGCAGACGGCGGGCTGGCACGGACCGTGTGCCAGCGCTGCTGGCTGCTGTCGCA
CCACCGGCGCGCTCTACGCCTGCAGGTGAGCCGCGAGCAGTACCTGGAGCTGGTGAGCGCCGCGTTGCGG
CGGCCCGGCCCCTCCCTGGTGCTCTACATGGTGGACCTGCTGGACCTGCCCGACGCCCTGCTGCCCGACT
TGCCCGCGCTGGTGGGCCCCAAGCAGCTGATCGTGCTGGGAAACAAAGTGGACCTCCTGCCCCAGGATGC
TCCTGGCTACCGGCAGAGGCTGCGGGAGCGACTGTGGGAGGACTGTGCCCGCGCCGGGCTCCTGCTGGCC
CCTGGCCACCAAGGGCCACAGCGCCCCGTCAAGGACGAGCCACAGGACGGGGAGAATCCGAATCCGCCGA
ACTGGTCCCGCACAGTGGTCAGGGACGTGCGGCTGATCAGCGCCAAGACCGGCTATGGAGTGGAAGAGTT
GATCTCTGCCCTTCAGCGCTCCTGGCGCTACCGTGGGGACGTCTACTTAGTGGGCGCCACCAACGCCGGC
AAATCCACTCTCTTTAACACGCTCCTGGAGTCCGATTACTGCACTGCCAAGGGCTCCGAGGCCATCGACA
GAGCCACCATCTCCCCTTGGCCAGGTACTACATTAAACCTTCTGAAGTTTCCTATTTGCAACCCAACTCC
TTACAGAATGTTTAAAAGGCATCAAAGACTTAAAAAAGATTCAACTCAAGCTGAAGAAGATCTTAGTGAG
CAAGAACAAAATCAGCTTAATGTCCTCAAAAAGCATGGTTATGTCGTAGGAAGAGTTGGAAGGACATTCT
TGTATTCAGAAGAACAGAAGGATAACATTCCCTTTGAGTTTGATGCTGATTCACTTGCCTTTGACATGGA
AAATGACCCTGTTATGGGTACACACAAATCCACCAAACAAGTAGAATTGACTGCACAAGATGTGAAAGAT
GCCCACTGGTTTTATGACACCCCTGGAATTACAAAAGAAAATTGTATTTTAAATCTTCTAACAGAAAAAG
AAGTAAATATTGTTTTGCCAACACAGTCCATTGTTCCAAGAACTTTTGTGCTTAAACCAGGAATGGTTCT
GTTTTTGGGTGCTATAGGCCGCATAGATTTCCTGCAGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCT
TCCAACATCCTCCCTGTGCATATCACCTCCTTGGACAGGGCAGACGCTCTGTATCAGAAGCATGCAGGTC
ATACGTTACTCCAGATTCCAATGGGTGGAAAAGAACGAATGGCAGGATTTCCTCCTCTTGTTGCTGAAGA
CATTATGTTAAAAGAAGGACTGGGGGCATCTGAAGCAGTGGCCGACATCAAGTTTTCCTCTGCAGGTTGG
GTTTCAGTAACACCTAATTTTAAGGACAGACTGCATCTCCGAGGCTATACACCTGAAGGAACAGTTTTGA
CCGTCCGGCCCCCTCTCTTGCCATATATTGTTAACATCAAAGGACAGCGCATCAAGAAAAGTGTGGCCTA
TAAAACCAAGAAGCCTCCTTCCCTTATGTACAACGTGAGGAAGAAGAAAGGAAAGATAAATGTATGA

Translation (698 aa):
MLPARLPFRLLSLFLRGSAPTAARHGLREPLLERRCAAASSFQHSSSLGRELPYDPVDTEGFGEGGDMQE
RFLFPEYILDPEPQPTREKQLQELQQQQEEEERQRQQRREERRQQNLRARSREHPVVGHPDPALPPSGVN
CSGCGAELHCQDAGVPGYLPREKFLRTAEADGGLARTVCQRCWLLSHHRRALRLQVSREQYLELVSAALR
RPGPSLVLYMVDLLDLPDALLPDLPALVGPKQLIVLGNKVDLLPQDAPGYRQRLRERLWEDCARAGLLLA
PGHQGPQRPVKDEPQDGENPNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAG
KSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMFKRHQRLKKDSTQAEEDLSE
QEQNQLNVLKKHGYVVGRVGRTFLYSEEQKDNIPFEFDADSLAFDMENDPVMGTHKSTKQVELTAQDVKD
AHWFYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGNQSAWFTVVA
SNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKEGLGASEAVADIKFSSAGW
VSVTPNFKDRLHLRGYTPEGTVLTVRPPLLPYIVNIKGQRIKKSVAYKTKKPPSLMYNVRKKKGKINV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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