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Report for CCDS23045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23045.1 Public Mus musculus 9 Or8g33 23 108 98 CCDS HistoryNCBI Gene:235248Re-query CCDS DB by CCDS ID:23045.1Re-query CCDS DB by GeneID:235248See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23045.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073895.3 ENSMUSP00000073558.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073895.3Link to Ensembl Protein Viewer:ENSMUSP00000073558.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000073895Re-query CCDS DB by Protein ID:ENSMUSP00000073558
Original member Current member NCBI NM_146503.2 NP_666714.1 Accepted alive Link to Nucleotide Sequence:NM_146503.2Link to Protein Sequence:NP_666714.1Re-query CCDS DB by Nucleotide ID:NM_146503Re-query CCDS DB by Protein ID:NP_666714Link to BLAST:NP_666714.1

Chromosomal Locations for CCDS 23045.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 39426125 39427069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGAAGAATTAAATCATACCCCAGTGGCAGAGTTCATTCTTGCTGGTTTAACAGAGAATCCAGAACTCC
AATTGCCTCTATTCCTTATCTTCCTATCTGTCTATTTGTTTACAGTTGTTGGAAACTTAGGAATGATTGT
CTTGATTCTGATTAGTTCTCAGCTACATACACCTATGTATTATTTACTCAGCAGTCTGTCCTTTATTGAC
TGCTGTCAGTCTACTGTCATTGTTCCTAAAATGCTGTTGAACTTTGTGACAGAGAAGAATGTCATCCTGT
ACCCAGAATGCATAGCTCAGTTCTATTTCTTCTGTACTTTTGTTGTTGCAAAATGTCACATGTTGGCTGC
AATGGCATATGACCGCTATGTGGCTATATCTAACCCTTTGCTTTACAAAGTAACCATGTCCTATCAAGTC
TGTTTGTTGATGGTAGCTGTGGTATATGGTATTGGCTTAATCAGTGCCACAGCTCACACAGTCTTCCTGC
TAAGATTGTTTTTCTGTAAGGCTGATAAAATAAACCACTACTTTTGTGATCTTTTCCCATTACTTGAGCT
GTCTTGCTCTAGTACTTTTATCAATGAAATATTAGCACTGTCCTTCAGTGCATTTAATATTATTGTACCA
GCCATGACCATCATTGGCTCTTACATCTTCATCATTATCAGCATTTTGCACATTAAATCCTCTGGGGGCA
GAGTCAAGGCCTTTAGCACCTACAGCTCCCATATCTTGGCTGTTGCTATTTTCTTTGGTTCTACAACATT
CATGTATCTACAACCATCTTCAGTCAGCTCCATGGACCAATGGAAAGTGTCATCTGTGTTTTATACCATT
GTTGTGCCTGTGTTGAATCTCATGATCTACAGCCTGAGAAATAAAGATGTCAAAGTTGCCCTAAAAATGT
TACTACAGAAGATGTTTCCTCAAAACAAGGAATAG

Translation (314 aa):
MEELNHTPVAEFILAGLTENPELQLPLFLIFLSVYLFTVVGNLGMIVLILISSQLHTPMYYLLSSLSFID
CCQSTVIVPKMLLNFVTEKNVILYPECIAQFYFFCTFVVAKCHMLAAMAYDRYVAISNPLLYKVTMSYQV
CLLMVAVVYGIGLISATAHTVFLLRLFFCKADKINHYFCDLFPLLELSCSSTFINEILALSFSAFNIIVP
AMTIIGSYIFIIISILHIKSSGGRVKAFSTYSSHILAVAIFFGSTTFMYLQPSSVSSMDQWKVSSVFYTI
VVPVLNLMIYSLRNKDVKVALKMLLQKMFPQNKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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