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Report for CCDS26681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26681.1 Public Mus musculus 13 Ankrd34b 23 108 98 CCDS HistoryNCBI Gene:218440Re-query CCDS DB by CCDS ID:26681.1Re-query CCDS DB by GeneID:218440See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26681.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061594.12 ENSMUSP00000054330.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061594.12Link to Ensembl Protein Viewer:ENSMUSP00000054330.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000061594Re-query CCDS DB by Protein ID:ENSMUSP00000054330
Original member Current member EBI ENSMUST00000168871.1 ENSMUSP00000126289.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168871.1Link to Ensembl Protein Viewer:ENSMUSP00000126289.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168871Re-query CCDS DB by Protein ID:ENSMUSP00000126289
Original member Current member NCBI NM_175455.4 NP_780664.2 Accepted alive Link to Nucleotide Sequence:NM_175455.4Link to Protein Sequence:NP_780664.2Re-query CCDS DB by Nucleotide ID:NM_175455Re-query CCDS DB by Protein ID:NP_780664Link to BLAST:NP_780664.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780664.2 508 Q3UUF8 508 100% 0 0

Chromosomal Locations for CCDS 26681.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 92438262 92439788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1527 nt):
ATGGATGAAGGCTCAGAAGTTTCAACGGATGGAAATTCCTTGATCAAAGCAGTACATCAGAGCAGGCTTC
GCCTCACTAGACTTTTGCTAGAAGGTGGCGCCTACATCAACGAAAGCAACGACCGTGGGGAAACCCCTTT
AATGATTGCTTGTAAGACCAAACATGTCGATCAACAGAGCGTCGGTAGAGCCAAGATGGTTAAATACCTC
TTAGAGAACAGCGCTGACCCCAACATCCAGGACAAATCCGGGAAAAGTGCCCTGATGCACGCATGCTTGG
AAAGAGCCGGCCCAGAGGTGGTTTCCTTGCTCCTCAAGAGCGGGGCCGATCTCAGCTTGCAGGACCATTC
TGGCTACTCAGCTCTGGTTTATGCTATAAATGCGGAAGACAGAGATACCCTGAAAGTCCTCCTTAGTGCT
TGCCAGGCAAAGGGCAAAGAGGTTATCATTATAACCACAGCGAAGTCGCCCTCTGGGAGGCACACCACCC
AGCACCACCTAAACATGCCTCCCGCAGACATGGACGGGAGCCATCCCCCGGCCACGCCTTCGGAAATTGA
CATCAAAACAGCCTCGTTGCCACTTTCCTATTCTTCTGAGACGGACCTGACACTCTTTGGCTTCAAGGAT
AAGGAGTTGTGTGGGGGCAGTGATAATACCTGGGACCCAGACTCTCCTCCGAGGAAGCCTGTGATAGCCA
CTAATGGGCCCAAGCTATCCCAGGCTCCAGCCTGGATCAAGAGTACCCCATCATTAAAGCACCAGGCCAG
AGTGGCCTCCTTGCAAGAGGAGCTCCAAGATATCACTCCAGAGGAAGAAATAGCCTACAAAACCAACGCG
CTGGCACTCTCTAAGCGGTTCATCACCAGGCACCAGAGCATCGATGTAAAAGACACTGCACACTTGCTCA
GGGCCTTTGACCAGGTCAACTCAAGGAAAATGTCATATGATGAAATAAATTACCATTCCTTGTTTCCAGA
AGGAAGCCAGACAAGCGTGGAGATTCCCACTGACCGGGACCCAGACTCTAATCAGATTTTTGCCTCCACG
CTGAAGAGTATAGTTCAAAAGCGAAACTCTGGGGCCAATCACTACAGCTCTGATTCGCAGCTCGCTGAGG
GTGTCACCCCTCCAACCGTAGAAGATGGCAAAGCTGCAAAGAAAAAGATCTTCGCGCCATCTCCTTCCTT
GCTTTCAGGGTCCAAAGAATTAGTGGAGCCTGCTCCTCCAGGCCCCCTGAGCAGGAGGAATCACGCGGTG
TTGGAAAGGCGTGGTTCCGGGGCTTTCCCCTTAGACCACAGTCTGGCGCAGAGCAGACCCGGCTTTCTGC
CGCCCTTGAATGTGAATCCTCACCCTCCCATTACAGACATTGGTGTCAACAACAAGATCTGCGGCCTGCT
TTCTTGTGGCCAAAAAGCGCTTATGCCGACGGCCCCTATTTTCCCGAAAGAATTTAAAACCAAAAAGATG
CTGTTAAGGAGGCAGTCCCTGCAGACGGAACAAATTAAGCAATTAGTAAATTTTTAA

Translation (508 aa):
MDEGSEVSTDGNSLIKAVHQSRLRLTRLLLEGGAYINESNDRGETPLMIACKTKHVDQQSVGRAKMVKYL
LENSADPNIQDKSGKSALMHACLERAGPEVVSLLLKSGADLSLQDHSGYSALVYAINAEDRDTLKVLLSA
CQAKGKEVIIITTAKSPSGRHTTQHHLNMPPADMDGSHPPATPSEIDIKTASLPLSYSSETDLTLFGFKD
KELCGGSDNTWDPDSPPRKPVIATNGPKLSQAPAWIKSTPSLKHQARVASLQEELQDITPEEEIAYKTNA
LALSKRFITRHQSIDVKDTAHLLRAFDQVNSRKMSYDEINYHSLFPEGSQTSVEIPTDRDPDSNQIFAST
LKSIVQKRNSGANHYSSDSQLAEGVTPPTVEDGKAAKKKIFAPSPSLLSGSKELVEPAPPGPLSRRNHAV
LERRGSGAFPLDHSLAQSRPGFLPPLNVNPHPPITDIGVNNKICGLLSCGQKALMPTAPIFPKEFKTKKM
LLRRQSLQTEQIKQLVNF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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