NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, December 17, 2024, starting at 8:00 a.m. EST for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS49626.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49626.1 Public Mus musculus 15 Fam135b 23 108 98 CCDS HistoryNCBI Gene:70363Re-query CCDS DB by CCDS ID:49626.1Re-query CCDS DB by GeneID:70363See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49626.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022953.9 ENSMUSP00000022953.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022953.9Link to Ensembl Protein Viewer:ENSMUSP00000022953.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022953Re-query CCDS DB by Protein ID:ENSMUSP00000022953
Original member Current member NCBI NM_177819.3 NP_808487.2 Accepted alive Link to Nucleotide Sequence:NM_177819.3Link to Protein Sequence:NP_808487.2Re-query CCDS DB by Nucleotide ID:NM_177819Re-query CCDS DB by Protein ID:NP_808487Link to BLAST:NP_808487.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808487.2 1403 Q9DAI6 1403 100% 0 0

Chromosomal Locations for CCDS 49626.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 71445900 71446105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71448671 71448784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71450423 71450533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71452336 71452487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71453851 71453948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71456918 71457009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71459700 71459866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71462072 71464085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71471507 71471661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71478187 71478260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71478997 71479152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71488037 71488086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71490708 71490861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71519939 71520065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71525668 71525841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71529176 71529246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71532899 71533038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71561054 71561133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 71622002 71622078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4212 nt):
ATGTCTGAAGTACAAGGAACAGTTGAGTTTTCTGTGGAGCTACATAAATTTTATAATGTGGATCTCTTTC
AGAGAGGGTACTACCAGATCCGAGTGACCTTGAAAGTGTCTTCAAGGATCCCCCACAGGCTGAGTGCTTC
TATCGTCGGACAGTCAGAGAGCAGCAGTCTGCATTCAGCCTGTGTCCACGAGAGTGCTGTGCACAGTCGT
GTCTTCCAGATCTTATACAGAAACGAAGAAGTTTCCATAAATGACGCCATGCTTTTCCGGGTTCATTTGC
TCTTAGATGGTGAGAGGGTAGAAGATGCGCTGAGTGAGGTCGAGTTTCAGCTCAAGGTGGACCTGCACTT
TACCGATAGTGAGCAGCAGCTGAGAGATGTGACTGGGACACCGATGATCAGCAGCCGCACACTTGGTCTG
CACTTCCACCCGAGGAGGGGTCTGCACCACCAGGTCCCTGTCATGTTCGACTACTTCCACCTGTCAGTGA
TCTCAGTGGCCATACATGCTGCGCTGGTGGCTCTGCAGCAGCCCCTGATCAGTTTCACTCGCCCAGGAAG
AGGTTCCTGGTTAGGCAAAGGTGGCCCAGACACAGGACCAGAACAGCCCACCATTTCTCTGGAAAACTTG
GTCTTTGGAGCTGGATACTGCAAGCCAACTTCCTCAGAGGGAAGCTTCTATGTTCCCTCAGAGAACTGCA
TACAACATGCACACAAGTGGCACCGGGATCTCTGTCTACTGCTCCTTCATGCCTATCAGGGCCTCCGACT
CTATTTCCTGGTCATCATGAGAGACATTCCTGAGCTGCCCACCATGGAGCTGGAGGCTCTTGCTGTTGAA
GAAACACTTTCTCAGCTGTGCTCAGAGTTACAGATGCTGAACAACCCAGAGAAGATAGCAGAGCAGATCA
GCAAGGATCTTGCCTGGCTGGCTTCACATCTGATGGCTCTGTGGACCCAATTCCTGGACACAGTAACCCT
GCACTCCCAAGTCACCACTTATCTCACCCAGGAGCATCACACTTTGAGGGTCCGAAGGTTTTCTGAAGCT
TTTTTTTATATGGAGCACCAAAAACTCGCAGTCTTGACCTTTCAGGAAAACCTGATACAGACTCACAGCC
AGCTGTCCCTGGACATCCGGAACTCAGAGTACCTCACCAGCATGCCTCCATTGCCCGCAGAGTGCCTGGA
CATTGATGGTGACTGGAACACCCTGCCTGTTATCTTTGAAGACAGATATGTGGACTGCCCTGTCTCAGGG
CATAACTTGAGTGTTTATCCTAATTTTGATGTCCCAGTGACAAGTCCTGCAATAATGAATCTAAAAGGGA
AAGAAAAGAATCTTATAAATCAAAACTCATCTTCAAGAAAGGACATTCCCTTATCTACTACAGAAGCACC
CCAGCTGGGCTCTGATGAAGATGTTACTAGGCGTCCAGAGGTGCAGGAGAATGTCTCCACATGGAATCCT
ATCGATGTGTGCTCAGAATCTCAGGTGTACCTGACCATTGGTGAATTTCAAAACAGAGCAGGCATACCTG
AAGATGAATGCTGGACTGGCCCTAGGCCTGATGCTGTAAAAGATTCACTAACAGATACGGACATATGTAG
CAGAAGTCCAGGCCCTGATGAAGGGCAGACCCCAGCACTGACCTATATTGATGTGCAATCTAGCAATAAG
TACTGCCCTAGAGCTGAACTGGTACAGGGCATTAATGTTCAGCATGAACACAGGAGCTCAAGGGAGAGCT
ATGGTATTGTTAAGACTGTGCCAAGCAAAGTTGTAGCAGGAACAAGCCAGAATAATTCCACCTCTTTAAA
CCAAACGGCTGCTCTTGAGTTGAGGACTCTAGGGAGGGGAGTCAACCAGGATGGAAAGCCTGTCCTGCTA
AGCCTGAAGCTCACCCCTGCTGAGCCCTGTGACCCACCGAGCACTGCTCTGAGGGAAGCATTGGACACTA
AACCTTCCCAGCCTGACCATGCTGAAGAGCCAGAGGATCTTTCAGCGCTCTCTGGCGTTATCAAGAGGTC
AGCCTCCATAATATCTGATTCAGGCATTGAAAGTGAACCAAGCTCAGTTGCCTGGTCTGAGGCCCGTAGC
AGAGCCCTGGAGTTACCCAGTGATCGTGACGTCTTACATCAGGTGGTTCGAAGGCATGCGCACCACAGGA
ACTCTTTGGAGGGTGGTCACACAGAAAGTAACACGAGCCTGCCCAGTGGCATTCAGGCTTCTCTTTCCTC
CATCAGCTCATTGCCTTTTGAAGAGGAAGAGCGTGAGCTGGCACTTAACAAGCTAACCAAGTCTGTGTCT
GCACCCCAGATCAGCAGCCCTGAGGAGTCTGCTGAAGGTGCAGACACCATAAAGAACACAGCAGGTTTTT
CTGAAGATCTGGACCCTTCTAGCAAAGAAAACAGTCCACCCAGACACACTTCTCTTTCGTATGGTGGGTC
TAGGGTCCAGGATGTTAGGGCAGGACATTCCCTTGCAGATATAGCTTTAGATTCTGACAGACCCCAGGGC
CCTGGTTACATGGACATCCCCAATGACAAAGGGAATCACCCTGAACTTCAAGAACCCTGTTGTCTGGATG
GCATGGCTGAGACCCCACTACATGTTGAAACCAAAGGTCTTAACTTAAAAATACCATGTACTATAGTGCT
TGAAAATTCTAAGTCCAGGTCTTTTCATAGAGCAGCAGGGGAAACTGCAAAAGGTAAACCCGAAGAATTG
AGCATGAGTAAATGCGTGCTCTCCAATAACAGCATCTCTGAAGTCAGGGCTGCGTCTCACCACAGGGTGC
CTGAAATCAGTTGTTCACCAGCTGTTGAAGCTGTCAACCTGAATTCTACAGGTGTACAAAATAGTTCGTT
AAGTGTCAATGATACCATGACATTGAATAGAAGACATAATGCCTCTCTGGAGGCCAAACATGAAGCAGGC
ACCGTGTGCCCCACTGTGACTCACACTATTGCCTCCCAAGTGTCACGAAACCAAGAGCTGAAGACAGGAA
CTTCCATCTCTGGGTCCCACTTGAACTCCACAGAGGCCTTTACTCTGGATAGCCTGAAGGCAGTGGAAGT
TGTTAACTTGTCTGTGTCTTGCACTGCCACATGTCTCCCTTTCTCATCTGTACCCAAGGAGACACCTGCC
AGGGCTGGACTCTCTTCCAAACAAAACCCAGCTCCTATTACTCATCAGCCTTTGGGTTCCTTTGGCGTTG
TTTCTACCTACTCCAGCAAGCTGGAAGAAGAAGTCAGTGAAAGGATGTTCAGTTTTTATCAGGCCAAAGA
AAAGTTTAAAAAAGAACTGAAGATTGAAGGATTTCTGTACAGTGACTTATCTGTACTAGCTTCTGACATA
CCATATTTCCCACCAGAGGAAGAGGAGGAAAACTTGGAAGATGGGATTCACCTGGTGGTCTGTGTCCATG
GCCTGGATGGCAACAGTGCAGACCTCCGGCTGGTGAAGACATTCATAGAACTGGGACTCCCTGGGGGAAA
ACTGGACTTCTTAATGTCTGAAAAGAATCAGACGGATACATTTGCAGATTTTGATACCATGACAGATCGA
TTGTTGGATGAGATTATTCAACACATCCAGTTGTACAACCTCTCCATATCCCGAATTAGCTTCATCGGCC
ATTCTCTTGGCAACATTATCATCAGATCCGTCCTTACAAGACCCCGGTTCCGGTATTACCTCAACAAACT
CCACACATTCTTGTCATTGTCTGGACCTCACCTGGGGACTCTGTACAACAATAGCACCCTGGTTAGTACT
GGTTTGTGGCTCATGCAGAAACTGAAGAAATCTGGCTCCCTTTTGCAGCTGACCTTCAGGGATAATGCTG
ATCTGCGCAAATGTTTCCTTTACCAACTTAGCCAAAAAACAGGGCTGCAGTATTTTAAAAACGTCGTTCT
GGTTGCTTCTCCCCAAGACCGCTATGTGCCATTTCATTCAGCCAGGATTGAAATGTGTAAAACCGCCCTC
AAGGACAGACACACAGGGCCAGTGTATGCAGAAATGATCAACAACCTCTTGGGCCCTCTGGTAGAAGCCA
AGGACTGCACTTTGATCAGACATAATGTGTTCCATGCTCTACCCAACACTGCCAACACCCTGATTGGACG
TGCAGCTCATATAGCCGTGCTGGACTCGGAACTCTTCCTTGAGAAGTTTTTCTTGGTGGCAGGACTCAAC
TATTTCAAGTAG

Translation (1403 aa):
MSEVQGTVEFSVELHKFYNVDLFQRGYYQIRVTLKVSSRIPHRLSASIVGQSESSSLHSACVHESAVHSR
VFQILYRNEEVSINDAMLFRVHLLLDGERVEDALSEVEFQLKVDLHFTDSEQQLRDVTGTPMISSRTLGL
HFHPRRGLHHQVPVMFDYFHLSVISVAIHAALVALQQPLISFTRPGRGSWLGKGGPDTGPEQPTISLENL
VFGAGYCKPTSSEGSFYVPSENCIQHAHKWHRDLCLLLLHAYQGLRLYFLVIMRDIPELPTMELEALAVE
ETLSQLCSELQMLNNPEKIAEQISKDLAWLASHLMALWTQFLDTVTLHSQVTTYLTQEHHTLRVRRFSEA
FFYMEHQKLAVLTFQENLIQTHSQLSLDIRNSEYLTSMPPLPAECLDIDGDWNTLPVIFEDRYVDCPVSG
HNLSVYPNFDVPVTSPAIMNLKGKEKNLINQNSSSRKDIPLSTTEAPQLGSDEDVTRRPEVQENVSTWNP
IDVCSESQVYLTIGEFQNRAGIPEDECWTGPRPDAVKDSLTDTDICSRSPGPDEGQTPALTYIDVQSSNK
YCPRAELVQGINVQHEHRSSRESYGIVKTVPSKVVAGTSQNNSTSLNQTAALELRTLGRGVNQDGKPVLL
SLKLTPAEPCDPPSTALREALDTKPSQPDHAEEPEDLSALSGVIKRSASIISDSGIESEPSSVAWSEARS
RALELPSDRDVLHQVVRRHAHHRNSLEGGHTESNTSLPSGIQASLSSISSLPFEEEERELALNKLTKSVS
APQISSPEESAEGADTIKNTAGFSEDLDPSSKENSPPRHTSLSYGGSRVQDVRAGHSLADIALDSDRPQG
PGYMDIPNDKGNHPELQEPCCLDGMAETPLHVETKGLNLKIPCTIVLENSKSRSFHRAAGETAKGKPEEL
SMSKCVLSNNSISEVRAASHHRVPEISCSPAVEAVNLNSTGVQNSSLSVNDTMTLNRRHNASLEAKHEAG
TVCPTVTHTIASQVSRNQELKTGTSISGSHLNSTEAFTLDSLKAVEVVNLSVSCTATCLPFSSVPKETPA
RAGLSSKQNPAPITHQPLGSFGVVSTYSSKLEEEVSERMFSFYQAKEKFKKELKIEGFLYSDLSVLASDI
PYFPPEEEEENLEDGIHLVVCVHGLDGNSADLRLVKTFIELGLPGGKLDFLMSEKNQTDTFADFDTMTDR
LLDEIIQHIQLYNLSISRISFIGHSLGNIIIRSVLTRPRFRYYLNKLHTFLSLSGPHLGTLYNNSTLVST
GLWLMQKLKKSGSLLQLTFRDNADLRKCFLYQLSQKTGLQYFKNVVLVASPQDRYVPFHSARIEMCKTAL
KDRHTGPVYAEMINNLLGPLVEAKDCTLIRHNVFHALPNTANTLIGRAAHIAVLDSELFLEKFFLVAGLN
YFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH