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Report for CCDS30235.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30235.1 Public Mus musculus X Gab3 23 108 98 CCDS HistoryNCBI Gene:210710Re-query CCDS DB by CCDS ID:30235.1Re-query CCDS DB by GeneID:210710See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30235.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037374.10 ENSMUSP00000041951.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037374.10Link to Ensembl Protein Viewer:ENSMUSP00000041951.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000037374Re-query CCDS DB by Protein ID:ENSMUSP00000041951
Original member Current member NCBI NM_181584.4 NP_853615.1 Accepted alive Link to Nucleotide Sequence:NM_181584.4Link to Protein Sequence:NP_853615.1Re-query CCDS DB by Nucleotide ID:NM_181584Re-query CCDS DB by Protein ID:NP_853615Link to BLAST:NP_853615.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_853615.1 595 Q8BSM5 595 100% 0 0

Chromosomal Locations for CCDS 30235.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 74988720 74988836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74990054 74990170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 74999965 75000100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75001811 75001892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75004324 75004531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75005316 75005371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75024778 75025256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75025989 75026205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75033171 75033474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75084668 75084739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1788 nt):
ATGAGCACTGGTGACACTGTGTGCATGGGCTGGCTCATCAAGTCGCCTCCCGAGAGGAAGCTGCAGCGCT
ATGCTTGGCGCAAACGCTGGTTTGTCCTCAGGCGGGGCCGCATGAGTGGCAATCCTGATGTCTTAGAATA
CTACCGCAACAAGCACTCCAACAAGCCCATCCGTGTGATAGACCTCAGTGAATGCACTGTGTGGAAACAT
GCAGGCCCTGGTTTCATTAGGAAGGAATTTCAGAAAAATTTTGTGTTTATTGTCAAGACCACTTCCCGTA
CATTCTACCTAGTAGCCAAGACTGAGGAAGAAATGCAGGTGTGGGTACACAGCATCAGTCAAGTTTGCAA
TTTCAGTCATCTGGAAGATGGTGCAGATTCCATGGAGAGTCTCTCTCACATGCCCTCCTCCTTCCAGCCA
TCTCCTGCCAGTTCACTTCATACTGTCCATGTTGCCAACTCTGCCTTACTAAAAGATGACCGAAACACTA
ATAGTGTAGTCACTGAGGAAACCAGACGTGAGTCAGAGTTTCTGTTCCTTCCTGATTATCTGATCCTGTC
CAACTGTGAGACTGGAAGACTACACCATGCCAGTCTTCCCACCAGATGTGATAGCTGGTCAAATTCAAAC
CACTCATTGGCACAGACTTCATTTGATGATGTTTTTCTTGATGGTCTACAGCCATTTATCTCTAATAATT
TGGTCCATCCCTTGCACCATGGGAAAGTATCTCAGGATTTTCCTTCCATACGGCCCCAGGCTTCTTTAAT
CTGGAATAGAGAAATCAATGGCCCATCTAGGAACCTCATGTCTTCTTCACCATTGTTGGAATCTTCCTTA
AACCCCACAGTTCATGTAGAAGAAAAGCAAGTTTCCTTACCCAGTGGGGTAAAAGAACTAAACATTATGT
CTAACACTCCACCTCCTCGTCCCCCTAAGCCAAGTTATCTCTCTGAACAACGCCAAGATCAGCCCTTGTT
GACTGGGCACAGCAGTAACAAGAAGCCAGGGTATACTATGGTACCAAGAAGAATCTCTCTCTCTGGGTTA
GACCATGTGGGGTCCTGGAAAGGTGATGTACAAAGCCAATCCTTAAGACACAGAGATAAGCGGCTCAGTT
TAAATCTGCCATGTAAGTTTTCACCGATATATCCCACAGCTTCACCCAGTGCTGAAGACAGCTATGTGCC
CATGAGCCCTAAAGGCACTGCTTCTGAACTTAGACCCCATTGCAGCCAGGATGACTACATTCCAATGAGC
TCAAGCATGCTGCCTGAGTTACCTGCAGACTTGGAGCCACCCCCAGTGAACAGAAATCTCAAGCCCCAGA
GAAAATCACGGCCACCTCCCTTGGACTCGAGAAACCTTTCCACCATCCAGGAACACACATCTCTAACCAG
GACTTACACTGTGCCTTGCAATCGAACCAGTTTTCTCTCTCCACAAAGAAATGGTATTAATTGTGCAAGA
CTTTTTTCCACTCCTTCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAA
AGTACATCCAAATGGAGGAATACGGAACAGTCAGTTCCCTGAGCAGAAGTGCTCTTTCTTGGACAAAGAA
ATTCAGCTTGGATTATTTGGCCCTGGACTTCAATTCAACATCACCAGCCCCTGTACAGAAGAAACTTCTC
CTTTCAGAAGAGCAGAGAGTAGACTATGTTCAAGTGGATGAACAAAAGACACAAGCTCTTCGGAGCACCA
AGCAGGAATGGACTGATGAGAGGCAATCCAAAGTGTGA

Translation (595 aa):
MSTGDTVCMGWLIKSPPERKLQRYAWRKRWFVLRRGRMSGNPDVLEYYRNKHSNKPIRVIDLSECTVWKH
AGPGFIRKEFQKNFVFIVKTTSRTFYLVAKTEEEMQVWVHSISQVCNFSHLEDGADSMESLSHMPSSFQP
SPASSLHTVHVANSALLKDDRNTNSVVTEETRRESEFLFLPDYLILSNCETGRLHHASLPTRCDSWSNSN
HSLAQTSFDDVFLDGLQPFISNNLVHPLHHGKVSQDFPSIRPQASLIWNREINGPSRNLMSSSPLLESSL
NPTVHVEEKQVSLPSGVKELNIMSNTPPPRPPKPSYLSEQRQDQPLLTGHSSNKKPGYTMVPRRISLSGL
DHVGSWKGDVQSQSLRHRDKRLSLNLPCKFSPIYPTASPSAEDSYVPMSPKGTASELRPHCSQDDYIPMS
SSMLPELPADLEPPPVNRNLKPQRKSRPPPLDSRNLSTIQEHTSLTRTYTVPCNRTSFLSPQRNGINCAR
LFSTPSEEEEEEEEEEEEEEEEEKYIQMEEYGTVSSLSRSALSWTKKFSLDYLALDFNSTSPAPVQKKLL
LSEEQRVDYVQVDEQKTQALRSTKQEWTDERQSKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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