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Report for CCDS31496.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31496.1 Public Homo sapiens 11 OR4C12 24 110 108 CCDS HistoryNCBI Gene:283093Re-query CCDS DB by CCDS ID:31496.1Re-query CCDS DB by GeneID:283093See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31496.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335238.4 ENSP00000334418.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335238.4Link to Ensembl Protein Viewer:ENSP00000334418.4Re-query CCDS DB by Nucleotide ID:ENST00000335238Re-query CCDS DB by Protein ID:ENSP00000334418
Original member Current member NCBI NM_001005270.4 NP_001005270.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005270.4Link to Protein Sequence:NP_001005270.3Re-query CCDS DB by Nucleotide ID:NM_001005270Re-query CCDS DB by Protein ID:NP_001005270Link to BLAST:NP_001005270.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005270.3 309 Q96R67 309 100% 0 0

Chromosomal Locations for CCDS 31496.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 49981572 49982501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGAGAAGAAAAAGAATGTGACTGAATTCATTTTAATAGGTCTTACACAGAACCCCATAATGGAGAAAG
TCACGTTTGTAGTATTTTTGGTTCTTTACATGATAACACTTTCAGGCAACCTGCTCATTGTGGTTACCAT
TACCACCAGCCAGGCTCTGAGCTCCCCCATGTACTTCTTCCTGACCCACCTTTCTTTGATAGACACAGTT
TATTCTTCTTCTTCAGCTCCTAAGTTGATTGTGGATTCCTTTCAAGAGAAGAAAATCATCTCCTTTAATG
GGTGTATGGCTCAAGCCTATGCAGAACACATTTTTGGTGCTACTGAGATCATCCTGCTGACAGTGATGGC
CTGTGACTGCTATGTGGCCATCTGCAAACCTCTGAACTACACAACCATTATGAGCCACAGCCTGTGCATT
CTCCTGGTGGCAGTGGCCTGGGTGGGAGGATTTCTTCATGCAACTATTCAGATTCTCTTTACAGTATGGC
TGCCCTTCTGTGGCCCCAATGTCATAGGCCACTTCATGTGTGACTTGTACCCATTGTTAAAACTTGTTTG
CATAGACACTCATACCCTTGGTCTCTTTGTTGCTGTGAACAGTGGGTTTATCTGCTTATTAAACTTCCTT
ATCTTGGTGGTATCCTATGTGATCATCTTGAGATCTTTAAAGAACAATAGCTTGGAGGGGAGGTGTAAAG
CCCTCTCCACCTGTATTTCTCACATCATAGTAGTTGTCTTATTCTTTGTGCCCTGTATATTTGTGTATCT
GCGCTCAGTGACCACTCTGCCCATTGATAAAGCTGTTGCTGTATTTTATACTATGGTGGTCCCAATGTTA
AATCCCGTGGTCTACACACTCAGAAATGCTGAGGTAAAAAGTGCAATAAGGAAGCTTTGGAGAAAAAAAG
TGACTTCAGATAATGATTAA

Translation (309 aa):
MEKKKNVTEFILIGLTQNPIMEKVTFVVFLVLYMITLSGNLLIVVTITTSQALSSPMYFFLTHLSLIDTV
YSSSSAPKLIVDSFQEKKIISFNGCMAQAYAEHIFGATEIILLTVMACDCYVAICKPLNYTTIMSHSLCI
LLVAVAWVGGFLHATIQILFTVWLPFCGPNVIGHFMCDLYPLLKLVCIDTHTLGLFVAVNSGFICLLNFL
ILVVSYVIILRSLKNNSLEGRCKALSTCISHIIVVVLFFVPCIFVYLRSVTTLPIDKAVAVFYTMVVPML
NPVVYTLRNAEVKSAIRKLWRKKVTSDND


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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