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Report for CCDS52038.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52038.1 Public Mus musculus 7 Inafm1 23 108 98 CCDS HistoryNCBI Gene:66300Re-query CCDS DB by CCDS ID:52038.1Re-query CCDS DB by GeneID:66300See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 52038.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000169612.2 ENSMUSP00000127027.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169612.2Link to Ensembl Protein Viewer:ENSMUSP00000127027.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169612Re-query CCDS DB by Protein ID:ENSMUSP00000127027
Original member Current member NCBI NM_001136270.1 NP_001129742.1 Accepted alive Link to Nucleotide Sequence:NM_001136270.1Link to Protein Sequence:NP_001129742.1Re-query CCDS DB by Nucleotide ID:NM_001136270Re-query CCDS DB by Protein ID:NP_001129742Link to BLAST:NP_001129742.1

Chromosomal Locations for CCDS 52038.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 16272898 16273290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (393 nt):
ATGCGGGGCTCGAGCTGCGTGGGCAGTGGTGGCGAGAGCCCGGGTGGTACGGGGCTGAGCGAGGGTCCCC
GTGGCCGATGGCTGCGGCTCGCCCCTGTCTGCGCCTACTTCCTGTGTGTGTCCTTGGCCGCTGTGCTGCT
TGCTGTGTACTACGGGCTCATCTGGGTTCCCACGCGGCCGCCTGCGGGCCCCGCCGACCCCCTGCCCAGC
GCTGCGGCCGCTCCGTGTGCTCGAGCAGCACCGCCCGCCCCGCCTCCGGCCGCACCCGCATCCTGTTTGC
TTGGGGCCTCCGGCGGGCCACGACCGCAGCCAGGACTGCCACGGAGTCGCCGCCACAGTCGCCGCCCAGC
TCCGGGAGCGACGCGGGAGACCGCGCGCCGAGCGCCTGGATAG

Translation (130 aa):
MRGSSCVGSGGESPGGTGLSEGPRGRWLRLAPVCAYFLCVSLAAVLLAVYYGLIWVPTRPPAGPADPLPS
AAAAPCARAAPPAPPPAAPASCLLGASGGPRPQPGLPRSRRHSRRPAPGATRETARRAPG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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