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Report for CCDS50049.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50049.1 Public Mus musculus 17 Mapk14 23 108 98 CCDS HistoryNCBI Gene:26416Re-query CCDS DB by CCDS ID:50049.1Re-query CCDS DB by GeneID:26416See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50049.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114752.2 ENSMUSP00000110400.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114752.2Link to Ensembl Protein Viewer:ENSMUSP00000110400.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114752Re-query CCDS DB by Protein ID:ENSMUSP00000110400
Original member Current member EBI ENSMUST00000114754.7 ENSMUSP00000110402.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114754.7Link to Ensembl Protein Viewer:ENSMUSP00000110402.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114754Re-query CCDS DB by Protein ID:ENSMUSP00000110402
Original member Current member NCBI NM_001168513.1 NP_001161985.1 Accepted alive Link to Nucleotide Sequence:NM_001168513.1Link to Protein Sequence:NP_001161985.1Re-query CCDS DB by Nucleotide ID:NM_001168513Re-query CCDS DB by Protein ID:NP_001161985Link to BLAST:NP_001161985.1
Original member Current member NCBI NM_001168514.1 NP_001161986.1 Accepted alive Link to Nucleotide Sequence:NM_001168514.1Link to Protein Sequence:NP_001161986.1Re-query CCDS DB by Nucleotide ID:NM_001168514Re-query CCDS DB by Protein ID:NP_001161986Link to BLAST:NP_001161986.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161985.1 283 P47811-4 283 100% 0 0
NP_001161986.1 283 P47811-4 283 100% 0 0

Chromosomal Locations for CCDS 50049.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 28713889 28713903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28715383 28715441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28724744 28724855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28725493 28725522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28725797 28725844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28728357 28728471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28728904 28728975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28737011 28737090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28741788 28741866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28744983 28745156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28746271 28746338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGAAACACGAAAATGTGATTGGTCTGTTGGATGTGTTCACACCCGCAAGGTCACTGGAGGAATTCAATG
ACGTGTACCTGGTGACCCATCTCATGGGGGCGGACCTGAACAACATCGTGAAGTGCCAGAAGCTGACCGA
CGACCACGTTCAGTTTCTCATCTACCAGATCCTCCGAGGGCTGAAGTATATACATTCGGCTGACATAATT
CACAGGGACCTAAAGCCCAGCAACCTAGCTGTGAACGAAGACTGTGAGCTCAAGATTCTGGATTTTGGGC
TGGCTCGGCACACTGATGATGAGATGACAGGCTACGTGGCTACCAGGTGGTACCGAGCCCCAGAGATCAT
GCTGAATTGGATGCACTATAACCAGACAGTGGATATTTGGTCCGTGGGCTGCATCATGGCTGAGCTGTTG
ACCGGAAGAACGTTGTTTCCTGGTACAGACCATATTGATCAGTTGAAGCTCATTTTAAGACTCGTTGGAA
CCCCAGGGGCTGAGCTTCTGAAGAAAATCTCCTCAGAGTCTGCAAGAAACTACATTCAGTCTCTGGCCCA
GATGCCGAAGATGAACTTCGCAAATGTATTTATTGGTGCCAATCCCCTGGCTGTCGACCTACTGGAGAAG
ATGCTCGTTTTGGACTCAGATAAGAGGATCACAGCAGCCCAAGCTCTTGCGCATGCCTACTTTGCTCAGT
ACCACGACCCTGATGATGAGCCTGTTGCTGACCCTTATGACCAGTCCTTTGAAAGCAGGGACCTTCTCAT
AGATGAGTGGAAGAGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCACCACCCCTTGACCAAGAAGAA
ATGGAGTCCTGA

Translation (283 aa):
MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII
HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL
TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEK
MLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVPPPLDQEE
MES


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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