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Report for CCDS53916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53916.1 Public Homo sapiens 14 TEX22 24 110 108 CCDS HistoryNCBI Gene:647310Re-query CCDS DB by CCDS ID:53916.1Re-query CCDS DB by GeneID:647310See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53916.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000451127.3 ENSP00000397002.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451127.3Link to Ensembl Protein Viewer:ENSP00000397002.2Re-query CCDS DB by Nucleotide ID:ENST00000451127Re-query CCDS DB by Protein ID:ENSP00000397002
Original member Current member NCBI NM_001195082.2 NP_001182011.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001195082.2Link to Protein Sequence:NP_001182011.1Re-query CCDS DB by Nucleotide ID:NM_001195082Re-query CCDS DB by Protein ID:NP_001182011Link to BLAST:NP_001182011.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182011.1 150 C9J3V5 150 100% 0 0

Chromosomal Locations for CCDS 53916.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 105399341 105399490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105411368 105411496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 105411660 105411833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (453 nt):
ATGGACAGCAGGAAACTGTCCCCCCGGGGGAAGAAGCTGGAGTCGCACCTCTCCCAAGAGCACAGGCGGC
CCCCACTGGGCCTGATAGCAGCCTGGGGCCAGCCCAGTATCCAGAGCAGCGTTCAGCAGGGACTGCAGAC
TCAGGACTGGGTGTGCGAGCCGCCGGAACGCAGGCGCCCGGGCCGCCGCTGGAGCGTCAGCATCGACGAG
CGCCGGCGGCTGGCCACGCTGGGCGGCCGGGAGAGGCCGGGCGCCGCCGGGACCCAGCTGCACTGCAGGG
ACGTCGTGCAGATGGTAGCCCAGCTGGTGTCGGAGGACGTGGACAAGGACGTGCTCCTTCCCCACCCGCT
GAGGTCCACCGAGTCCACCAACGCCTTCCAGGCCTTCCTGGCGCGCAGTGCGCCTTTCTGGCATAATGCG
ACTTTCGAGGCCTCGAGGTCACCCCCTTCCTAA

Translation (150 aa):
MDSRKLSPRGKKLESHLSQEHRRPPLGLIAAWGQPSIQSSVQQGLQTQDWVCEPPERRRPGRRWSVSIDE
RRRLATLGGRERPGAAGTQLHCRDVVQMVAQLVSEDVDKDVLLPHPLRSTESTNAFQAFLARSAPFWHNA
TFEASRSPPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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