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Report for CCDS33683.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33683.1 Public Homo sapiens 22 RABL2B 24 110 108 CCDS HistoryNCBI Gene:11158Re-query CCDS DB by CCDS ID:33683.1Re-query CCDS DB by GeneID:11158See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33683.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354869.8 ENSP00000346940.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354869.8Link to Ensembl Protein Viewer:ENSP00000346940.3Re-query CCDS DB by Nucleotide ID:ENST00000354869Re-query CCDS DB by Protein ID:ENSP00000346940
Original member Current member EBI ENST00000395595.8 ENSP00000378960.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395595.8Link to Ensembl Protein Viewer:ENSP00000378960.3Re-query CCDS DB by Nucleotide ID:ENST00000395595Re-query CCDS DB by Protein ID:ENSP00000378960
Original member Current member EBI ENST00000691320.1 ENSP00000509250.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000691320.1Link to Ensembl Protein Viewer:ENSP00000509250.1Re-query CCDS DB by Nucleotide ID:ENST00000691320Re-query CCDS DB by Protein ID:ENSP00000509250
Original member Current member NCBI NM_001003789.3 NP_001003789.1 Accepted alive Link to Nucleotide Sequence:NM_001003789.3Link to Protein Sequence:NP_001003789.1Re-query CCDS DB by Nucleotide ID:NM_001003789Re-query CCDS DB by Protein ID:NP_001003789Link to BLAST:NP_001003789.1
Original member Current member NCBI NM_001130919.3 NP_001124391.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130919.3Link to Protein Sequence:NP_001124391.1Re-query CCDS DB by Nucleotide ID:NM_001130919Re-query CCDS DB by Protein ID:NP_001124391Link to BLAST:NP_001124391.1
Original member Current member NCBI NM_001130920.3 NP_001124392.1 Accepted alive Link to Nucleotide Sequence:NM_001130920.3Link to Protein Sequence:NP_001124392.1Re-query CCDS DB by Nucleotide ID:NM_001130920Re-query CCDS DB by Protein ID:NP_001124392Link to BLAST:NP_001124392.1
Original member Current member NCBI NM_001130921.3 NP_001124393.1 Accepted alive Link to Nucleotide Sequence:NM_001130921.3Link to Protein Sequence:NP_001124393.1Re-query CCDS DB by Nucleotide ID:NM_001130921Re-query CCDS DB by Protein ID:NP_001124393Link to BLAST:NP_001124393.1
Original member Current member NCBI NM_001350003.2 NP_001336932.1 Accepted alive Link to Nucleotide Sequence:NM_001350003.2Link to Protein Sequence:NP_001336932.1Re-query CCDS DB by Nucleotide ID:NM_001350003Re-query CCDS DB by Protein ID:NP_001336932Link to BLAST:NP_001336932.1
Original member Current member NCBI NM_001350004.2 NP_001336933.1 Accepted alive Link to Nucleotide Sequence:NM_001350004.2Link to Protein Sequence:NP_001336933.1Re-query CCDS DB by Nucleotide ID:NM_001350004Re-query CCDS DB by Protein ID:NP_001336933Link to BLAST:NP_001336933.1
Original member Current member NCBI NM_001394054.1 NP_001380983.1 Accepted alive Link to Nucleotide Sequence:NM_001394054.1Link to Protein Sequence:NP_001380983.1Re-query CCDS DB by Nucleotide ID:NM_001394054Re-query CCDS DB by Protein ID:NP_001380983Link to BLAST:NP_001380983.1
Original member Current member NCBI NM_001394055.1 NP_001380984.1 Accepted alive Link to Nucleotide Sequence:NM_001394055.1Link to Protein Sequence:NP_001380984.1Re-query CCDS DB by Nucleotide ID:NM_001394055Re-query CCDS DB by Protein ID:NP_001380984Link to BLAST:NP_001380984.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003789.1 229 Q9UNT1-2 229 100% 0 0
NP_001124391.1 229 Q9UNT1-2 229 100% 0 0
NP_001124392.1 229 Q9UNT1-2 229 100% 0 0
NP_001124393.1 229 Q9UNT1-2 229 100% 0 0
NP_001336932.1 229 Q9UNT1-2 229 100% 0 0
NP_001336933.1 229 Q9UNT1-2 229 100% 0 0
NP_001380983.1 229 Q9UNT1-2 229 100% 0 0
NP_001380984.1 229 Q9UNT1-2 229 100% 0 0

Chromosomal Locations for CCDS 33683.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 50768776 50768874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50769041 50769124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50769455 50769552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50769905 50770016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50775772 50775851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50776670 50776749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50777952 50777981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50782188 50782294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGGCAGAAGACAAAACCAAACCGAGTGAGTTGGACCAAGGGAAGTATGATGCTGATGACAACGTGAAGA
TCATCTGCCTGGGAGACAGCGCAGTGGGCAAATCCAAACTCATGGAGAGATTTCTCATGGATGGCTTTCA
GCCACAGCAGCTGTCCACGTACGCCCTGACCCTGTACAAGCACACAGCCACGGTAGATGGAAGGACCATC
CTTGTGGACTTTTGGGACACGGCAGGCCAGGAGCGGTTCCAGAGCATGCATGCCTCCTACTACCACAAGG
CCCACGCCTGCATCATGGTGTTTGATGTACAGAGGAAAGTCACCTATAGGAACCTGAGCACCTGGTATAC
AGAGCTTCGGGAGTTCAGGCCAGAGATCCCATGCATCGTGGTGGCCAATAAAATTGATGCAGACATAAAC
GTGACCCAAAAAAGCTTCAATTTTGCCAAGAAGTTCTCCCTGCCCCTGTATTTCGTCTCGGCTGCTGATG
GTACCAATGTTGTGAAGCTCTTCAATGATGCAATTCGATTAGCTGTGTCTTACAAACAGAACTCCCAGGA
CTTCATGGATGAGATTTTTCAGGAGCTCGAGAACTTCAGCTTGGAGCAGGAAGAGGAGGACGTGCCAGAC
CAGGAACAGAGCAGCAGCATCGAGACCCCATCAGAGGAGGCGGCCTCTCCCCACAGCTGA

Translation (229 aa):
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGRTI
LVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELREFRPEIPCIVVANKIDADIN
VTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPD
QEQSSSIETPSEEAASPHS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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