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Report for CCDS11161.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11161.1 Public Homo sapiens 17 DNAH9 24 110 108 CCDS HistoryNCBI Gene:1770Re-query CCDS DB by CCDS ID:11161.1Re-query CCDS DB by GeneID:1770See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 11161.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000608377.5 ENSP00000476951.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000608377.5Link to Ensembl Protein Viewer:ENSP00000476951.1Re-query CCDS DB by Nucleotide ID:ENST00000608377Re-query CCDS DB by Protein ID:ENSP00000476951
Original member Current member NCBI NM_004662.2 NP_004653.2 Accepted alive Link to Nucleotide Sequence:NM_004662.2Link to Protein Sequence:NP_004653.2Re-query CCDS DB by Nucleotide ID:NM_004662Re-query CCDS DB by Protein ID:NP_004653Link to BLAST:NP_004653.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004653.2 798 Q9NYC9-3 798 100% 0 0

Chromosomal Locations for CCDS 11161.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 11886918 11886965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11891777 11891947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11894374 11894496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11902719 11902912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11905661 11905809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11923814 11923941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11929866 11930093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11932014 11932205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11933880 11934071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11937352 11937522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11942303 11942485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11961867 11962256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 11969300 11969527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2397 nt):
ATGAACGACCTCAGCAAGATCCATCCAATGTACCAGTTTTCTCTCAAGGCCTTCAGTATCGTCTTCCAGA
AGGCTGTGGAGAGGGCTGCTCCTGACGAAAGCCTCAGGGAGCGGGTGGCCAACCTAATAGACAGCATAAC
CTTCTCTGTGTACCAGTACACCATCCGCGGGCTCTTTGAGTGTGATAAGCTGACCTACCTTGCCCAGCTC
ACCTTTCAGATTCTCCTCATGAACCGAGAAGTCAATGCAGTGGAGTTGGATTTCCTGCTTCGATCTCCAG
TGCAGACGGGCACCGCCAGCCCCGTGGAGTTCCTCTCCCATCAGGCGTGGGGAGCTGTCAAGGTACTTTC
ATCAATGGAAGAATTCTCTAATCTGGATCGGGACATAGAGGGATCTGCTAAGAGCTGGAAAAAGTTTGTG
GAGTCCGAATGTCCTGAGAAAGAGAAGCTCCCACAGGAGTGGAAGAACAAGACAGCCCTGCAGCGCCTCT
GCATGCTGAGAGCCATGCGGCCCGACCGGATGACCTATGCTTTGCGAGATTTTGTTGAAGAGAAGTTAGG
AAGCAAATACGTGGTGGGAAGAGCCCTAGATTTTGCAACCTCATTTGAAGAATCGGGACCAGCCACTCCT
ATGTTTTTCATCCTGTCTCCAGGGGTGGACCCACTGAAGGATGTAGAAAGTCAAGGAAGAAAACTTGGAT
ACACCTTCAACAATCAGAACTTTCACAACGTGTCTTTGGGGCAAGGACAGGAAGTGGTGGCTGAGGCTGC
GCTGGACCTCGCTGCCAAGAAAGGTCACTGGGTTATTTTGCAGAACATTCACCTGGTGGCCAAGTGGCTC
AGCACCCTGGAGAAGAAGCTGGAGGAGCACAGTGAGAACAGCCACCCAGAGTTCAGGGTCTTCATGAGTG
CAGAGCCAGCACCCTCCCCTGAGGGCCACATCATCCCCCAGGGCATCCTGGAGAACTCCATTAAGATCAC
CAATGAGCCCCCCACGGGCATGCATGCCAACCTGCACAAGGCCCTGGACAACTTCACTCAGGACACTCTG
GAGATGTGTTCTCGGGAGACGGAGTTTAAGAGCATCCTCTTTGCTCTTTGTTACTTCCATGCGGTGGTGG
CAGAAAGACGAAAATTTGGGCCCCAGGGATGGAATCGCTCATACCCCTTTAACACTGGAGACCTCACTAT
CTCTGTGAATGTCCTCTACAACTTCCTGGAGGCCAACGCAAAGGTCCCCTATGATGATTTGCGCTACCTG
TTTGGAGAGATCATGTATGGAGGCCATATCACAGATGACTGGGACAGAAGACTCTGCAGAACCTACCTGG
GGGAATTCATTCGACCAGAAATGTTAGAAGGAGAACTGTCTTTGGCCCCAGGGTTCCCACTCCCAGGCAA
CATGGACTACAATGGTTATCATCAGTACATCGATGCTGAGCTGCCCCCAGAATCCCCCTACCTCTATGGC
CTCCACCCGAACGCAGAGATTGGCTTCCTGACCCAAACCTCAGAAAAGCTCTTCCGCACTGTGCTGGAGC
TGCAGCCTCGGGACAGCCAGGCCAGAGACGGAGCGGGCGCCACAAGAGAAGAAAAGGTCAAGGCACTTCT
GGAAGAAATATTGGAGCGGGTGACAGACGAGTTTAACATCCCAGAACTGATGGCCAAAGTGGAGGAGCGC
ACCCCTTACATTGTAGTTGCCTTCCAGGAGTGTGGCCGGATGAATATCCTCACCAGAGAGATTCAGCGCT
CACTGAGGGAGCTGGAGCTCGGCTTAAAGGGGGAGCTGACTATGACCAGCCACATGGAGAACTTACAGAA
TGCCCTGTACTTCGATATGGTGCCAGAGTCCTGGGCTAGACGAGCCTACCCTTCCACAGCAGGCCTGGCA
GCCTGGTTTCCAGACCTCCTCAACAGAATCAAGGAGCTAGAGGCTTGGACGGGTGACTTTACAATGCCCT
CCACTGTGTGGCTGACAGGCTTCTTCAACCCCCAGTCGTTCCTGACTGCCATCATGCAGTCCACGGCTCG
CAAGAATGAGTGGCCACTGGACCAGATGGCCCTGCAATGTGACATGACGAAGAAGAACAGAGAAGAGTTT
AGGAGTCCTCCTCGGGAAGGGGCCTACATCCATGGCCTCTTCATGGAAGGTGCCTGCTGGGACACACAGG
CTGGGATCATTACAGAGGCAAAGCTGAAGGATCTGACACCCCCTATGCCTGTGATGTTCATCAAGGCCAT
TCCTGCAGATAAGCAGGACTGCCGCAGTGTCTATTCCTGTCCTGTGTACAAGACTAGTCAGCGGGGACCC
ACCTACGTGTGGACTTTCAACCTGAAGACTAAGGAAAACCCATCCAAGTGGGTTCTGGCTGGAGTAGCCT
TGCTTCTCCAGATTTAG

Translation (798 aa):
MNDLSKIHPMYQFSLKAFSIVFQKAVERAAPDESLRERVANLIDSITFSVYQYTIRGLFECDKLTYLAQL
TFQILLMNREVNAVELDFLLRSPVQTGTASPVEFLSHQAWGAVKVLSSMEEFSNLDRDIEGSAKSWKKFV
ESECPEKEKLPQEWKNKTALQRLCMLRAMRPDRMTYALRDFVEEKLGSKYVVGRALDFATSFEESGPATP
MFFILSPGVDPLKDVESQGRKLGYTFNNQNFHNVSLGQGQEVVAEAALDLAAKKGHWVILQNIHLVAKWL
STLEKKLEEHSENSHPEFRVFMSAEPAPSPEGHIIPQGILENSIKITNEPPTGMHANLHKALDNFTQDTL
EMCSRETEFKSILFALCYFHAVVAERRKFGPQGWNRSYPFNTGDLTISVNVLYNFLEANAKVPYDDLRYL
FGEIMYGGHITDDWDRRLCRTYLGEFIRPEMLEGELSLAPGFPLPGNMDYNGYHQYIDAELPPESPYLYG
LHPNAEIGFLTQTSEKLFRTVLELQPRDSQARDGAGATREEKVKALLEEILERVTDEFNIPELMAKVEER
TPYIVVAFQECGRMNILTREIQRSLRELELGLKGELTMTSHMENLQNALYFDMVPESWARRAYPSTAGLA
AWFPDLLNRIKELEAWTGDFTMPSTVWLTGFFNPQSFLTAIMQSTARKNEWPLDQMALQCDMTKKNREEF
RSPPREGAYIHGLFMEGACWDTQAGIITEAKLKDLTPPMPVMFIKAIPADKQDCRSVYSCPVYKTSQRGP
TYVWTFNLKTKENPSKWVLAGVALLLQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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