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Report for CCDS52597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52597.1 Public Mus musculus 8 Eps15l1 23 108 98 CCDS HistoryNCBI Gene:13859Re-query CCDS DB by CCDS ID:52597.1Re-query CCDS DB by GeneID:13859See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52597.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000163643.2 ENSMUSP00000129739.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000163643.2Link to Ensembl Protein Viewer:ENSMUSP00000129739.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000163643Re-query CCDS DB by Protein ID:ENSMUSP00000129739
Original member Current member NCBI NM_007944.3 NP_031970.2 Accepted alive Link to Nucleotide Sequence:NM_007944.3Link to Protein Sequence:NP_031970.2Re-query CCDS DB by Nucleotide ID:NM_007944Re-query CCDS DB by Protein ID:NP_031970Link to BLAST:NP_031970.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031970.2 907 Q60902-1 907 100% 0 0

Chromosomal Locations for CCDS 52597.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 72341381 72341524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72345966 72346171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72358313 72358445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72367904 72367986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72368712 72368772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72371686 72371822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72373026 72373076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72373823 72373946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72378991 72379155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72380109 72380306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72380894 72381055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72381417 72381489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72382327 72382412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72382680 72382836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72384767 72384924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72386861 72387088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72389408 72389467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72391890 72392015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72396234 72396296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72396902 72396997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72399006 72399053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72399677 72399766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72400192 72400233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72421405 72421437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2724 nt):
ATGGCGGCGCCGCTTGTACCCCTCTCGCAGCAGATTCCCGGTGGAAATCCGTTATACGAGTCTTATTACA
AGCAGGTGGACCCTGCCTACACAGGGAGAGTTGGGGCAAGCGAGGCTGCGCTGTTTCTGAAGAAATCGGG
GCTCTCAGACATCATCCTGGGGAAGATATGGGACTTGGCAGACCCCGAAGGTAAAGGGTTCTTGGACAAA
CAGGGTTTCTATGTTGCACTGCGACTGGTGGCCTGTGCACAGAGTGGCCATGAAGTCACCTTGAGCAGTC
TGAGCCTCACCATGCCACCACCAAAATTTCATGATACCAGCAGCCCACTGATGGCCACACAGTCATCTGC
AGAGACCCACTGGGCTGTGCGGGTGGAGGAGAAGGCAAAGTTTGATGGCATCTTTGAAAGCCTTCTACCA
GTCAATGGGCTACTCTCTGGAGACAAGGTCAAGCCGGTCCTCATGAACTCGAAACTACCTCTGGATGTGC
TGGGCAGGGTCTGGGACCTCAGTGACATAGACAAGGATGGACATTTGGACCGAGATGAGTTTGCTGTGGC
TATGCACTTGGTGTACCGCGCCCTGGAGAAGGAACCAGTGCCCTCCATCCTGCCCCCGCCCCTCATCCCA
CCCTCTAAGAGGAAGAAGACTGTGTTTGCAGGAGCTGTGCCTGTCCTGCCTGCTAGTCCCCCACCCAAAG
ACAGCCTCCGCTCCACACCATCCCACGGCAGCGTAAGCAGCCTCAACAGCACAGGCAGCCTGTCCCCGAA
GCACAGCGTCAAGCAGCCACCAGTGGCCTGGGTTGTGCCTGTGGCAGATAAGATGCGCTTTGATGAGATC
TTTTTGAAGACAGACCTGGACCTTGATGGCTATGTGAGTGGCCAGGAAGTTAAGGAGATCTTCATGCACT
CAGGCCTCACTCAGAACCTTCTGGCACACATCTGGGCCCTGGCTGATACAAGACAAACGGGCAAGTTAAG
CAAAGAGCAGTTCGCACTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAAAGGCATCGACCCTCCTCAA
GTCCTCTCGCCTGACATGGTGCCACCCTCTGAGAGAGGCACTCCCATTCCAGACAGTTCAAGTACTCTGG
CATCAGGAGAGTTCACTGGTGTTAAAGAGCTGGATGACATTAGCCAGGAGATCGCACAGTTGCAGAGAGA
GAAATACTCATTGGAACAAGACATCAGAGAAAAGGAAGAGGCAATCAGACAGAAAACCAGCGAAGTACAG
GAATTACAAAATGACCTAGACCGGGAAACTAGTAGTCTGCAGGAGCTTGAGGCTCAGAAACAGGATGCCC
AGGACCGCCTGGATGAGATGGACCAGCAGAAGGCTAAGCTGCGGGACATGCTGAGTGACGTGCGGCAGAA
ATGCCAGGATGAGACCCAGACAATCTCATCATTGAAAACCCAGATTCAGTCTCAGGAGTCAGACTTGAAG
TCCCAGGAGGATGACCTGAACAGGGCCAAGTCAGAGCTGAATCGGCTGCAGCAAGAGGAGACACAGCTGG
AGCAGAGCATCCAGGCTGGACGTGCACAGCTGGAGACCATCCTCAGGTCCCTGAAGTGCACACAGGATGA
CATCAACCAGGCAAGAAGCAAGCTGTCCCAGCTACAGGAGAGCCACCTAGAAGCTCACCGGAGCCTGGAA
CAGTATGACCAGGTGCCTGATGGGGTCTCTGGTACCAGCCTGCCTGACCTGGCCACCTTGAACGAAGGCA
TCTTGCTGGCAGAGAGGGGCGGCTTTGGAGCTATGGATGATCCTTTCAAAAACAAAGCCTTATTGTTTAG
CAACAACTCCCAGGAACTTCATCCAGACCCCTTCCAGGCTGAGGACCCCTTCAAGTCCGACCCATTTAAA
GGAGCTGACCCCTTCAAAGGTGATCCTTTCCAAAGTGATCCCTTCTCAGAGCAGCAGACAGCAGCTACAG
ACCCATTTGGAGGGGATCCTTTCAAAGAAAGTGACCCATTCCACAGCTCAAGCAGTGATGACTTCTTCAA
GAAACAGACAAAGAATGACCCATTTACCTCAGACCCCTTCACAAAGAACCCTTCCTTACCTTCAAAGCTC
GACCCATTTGAGTCCAGTGATCCTTTTTCATCCTCCAGCATCTCCTCGAAAGGTTCAGATCCCTTTGGAA
CCCTAGACCCCTTTGGAAGCAGCTCCTTCAGCAGTGCCGAGGGCTTCGCTGACTTCAGTCAGATGTCCAA
GCCCCCACCTTCTGGCCCCTTCTCCTCCTCCTTGGGAGGCACAGGATTCTCAGATGACCCCTTTAAAAGT
AAACAGGACACTCCTGCTCTGCCTCCGAAGAAGCCCGCTCCTCCACGGCCCAAACCGCCCAGCGGTCAGA
GTACACCTGTAAGCCAGCTGGGTTCTTCAGACTTCCCTGAGTCCCCTGATCCATTCCAGCCACTCGGGGC
TGACAGCGGCGACCCGTTCCAAAATAAAAAGGGGTTTGGGGACCCATTTAGTGGCAAAGATCCATTTGCC
CCTTCCTCTTCAGCTAAACCTCCTAAGACCTCTTCCTCCGGCTTTGCCGACTTCACCTCTTTTGGCAATG
AGGAGCAGCAATTGGCTTGGGCCAAGCGGGAGAGTGAAAAAGCGGAGCAAGAGCGGCTGGCGAGGCTGCG
GCGACAGGAACAGGAGGACCTGGAACTGGCCATCGCCCTCAGCAAGGCTGATATGCCAGCCTAG

Translation (907 aa):
MAAPLVPLSQQIPGGNPLYESYYKQVDPAYTGRVGASEAALFLKKSGLSDIILGKIWDLADPEGKGFLDK
QGFYVALRLVACAQSGHEVTLSSLSLTMPPPKFHDTSSPLMATQSSAETHWAVRVEEKAKFDGIFESLLP
VNGLLSGDKVKPVLMNSKLPLDVLGRVWDLSDIDKDGHLDRDEFAVAMHLVYRALEKEPVPSILPPPLIP
PSKRKKTVFAGAVPVLPASPPPKDSLRSTPSHGSVSSLNSTGSLSPKHSVKQPPVAWVVPVADKMRFDEI
FLKTDLDLDGYVSGQEVKEIFMHSGLTQNLLAHIWALADTRQTGKLSKEQFALAMYFIQQKVSKGIDPPQ
VLSPDMVPPSERGTPIPDSSSTLASGEFTGVKELDDISQEIAQLQREKYSLEQDIREKEEAIRQKTSEVQ
ELQNDLDRETSSLQELEAQKQDAQDRLDEMDQQKAKLRDMLSDVRQKCQDETQTISSLKTQIQSQESDLK
SQEDDLNRAKSELNRLQQEETQLEQSIQAGRAQLETILRSLKCTQDDINQARSKLSQLQESHLEAHRSLE
QYDQVPDGVSGTSLPDLATLNEGILLAERGGFGAMDDPFKNKALLFSNNSQELHPDPFQAEDPFKSDPFK
GADPFKGDPFQSDPFSEQQTAATDPFGGDPFKESDPFHSSSSDDFFKKQTKNDPFTSDPFTKNPSLPSKL
DPFESSDPFSSSSISSKGSDPFGTLDPFGSSSFSSAEGFADFSQMSKPPPSGPFSSSLGGTGFSDDPFKS
KQDTPALPPKKPAPPRPKPPSGQSTPVSQLGSSDFPESPDPFQPLGADSGDPFQNKKGFGDPFSGKDPFA
PSSSAKPPKTSSSGFADFTSFGNEEQQLAWAKRESEKAEQERLARLRRQEQEDLELAIALSKADMPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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