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Report for CCDS41567.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41567.1 Public Homo sapiens 10 AS3MT 24 110 108 CCDS HistoryNCBI Gene:57412Re-query CCDS DB by CCDS ID:41567.1Re-query CCDS DB by GeneID:57412See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41567.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369880.8 ENSP00000358896.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369880.8Link to Ensembl Protein Viewer:ENSP00000358896.3Re-query CCDS DB by Nucleotide ID:ENST00000369880Re-query CCDS DB by Protein ID:ENSP00000358896
Original member Current member NCBI NM_020682.4 NP_065733.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020682.4Link to Protein Sequence:NP_065733.2Re-query CCDS DB by Nucleotide ID:NM_020682Re-query CCDS DB by Protein ID:NP_065733Link to BLAST:NP_065733.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065733.2 375 Q9HBK9-1 375 100% 0 0

Chromosomal Locations for CCDS 41567.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 102869593 102869593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102869805 102869845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102870084 102870211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102872448 102872598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102873097 102873233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102874592 102874661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102876954 102877035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102878379 102878510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102878849 102878991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102890544 102890678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102900593 102900700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGGCTGCACTTCGTGACGCTGAGATACAGAAGGACGTGCAGACCTACTACGGGCAGGTGCTGAAGAGAT
CGGCAGACCTCCAGACCAACGGCTGTGTCACCACAGCCAGGCCGGTCCCCAAGCACATCCGGGAAGCCTT
GCAAAATGTACACGAAGAAGTAGCCCTAAGATATTATGGCTGTGGTCTGGTGATCCCTGAGCATCTAGAA
AACTGCTGGATTTTGGATCTGGGTAGTGGAAGTGGCAGAGATTGCTATGTACTTAGCCAGCTGGTTGGTG
AAAAAGGACACGTGACTGGAATAGACATGACCAAAGGCCAGGTGGAAGTGGCTGAAAAGTATCTTGACTA
TCACATGGAAAAATATGGCTTCCAGGCATCTAATGTGACTTTTATTCATGGCTACATTGAGAAGTTGGGA
GAGGCTGGAATCAAGAATGAGAGCCATGATATTGTTGTATCAAACTGTGTTATTAACCTTGTGCCTGATA
AACAACAAGTGCTTCAGGAGGCATATCGGGTGCTGAAGCATGGTGGGGAGTTATATTTCAGTGACGTCTA
TACGAGCCTTGAACTGCCAGAAGAAATCAGGACACACAAAGTTTTATGGGGTGAGTGTCTGGGTGGTGCT
TTATACTGGAAGGAACTTGCTGTCCTTGCTCAAAAAATTGGGTTCTGCCCTCCACGTTTGGTCACTGCCA
ATCTCATTACAATTCAAAACAAGGAACTGGAAAGAGTTATCGGTGACTGTCGTTTTGTTTCTGCAACATT
TCGCCTCTTCAAACACTCTAAGACAGGACCAACCAAGAGATGCCAAGTTATTTACAATGGAGGAATTACA
GGACATGAAAAAGAACTAATGTTTGATGCCAATTTTACATTTAAGGAAGGTGAAATTGTTGAAGTGGATG
AAGAAACAGCAGCTATCTTGAAGAATTCAAGATTTGCTCAAGATTTTCTGATCAGACCAATTGGAGAGAA
GTTGCCAACATCTGGAGGCTGTTCTGCTTTGGAGTTAAAGGATATAATCACAGATCCATTTAAGCTTGCA
GAAGAGTCTGACAGTATGAAGTCCAGATGTGTCCCTGATGCTGCTGGAGGCTGCTGTGGCACAAAGAAAA
GCTGCTAA

Translation (375 aa):
MAALRDAEIQKDVQTYYGQVLKRSADLQTNGCVTTARPVPKHIREALQNVHEEVALRYYGCGLVIPEHLE
NCWILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQVEVAEKYLDYHMEKYGFQASNVTFIHGYIEKLG
EAGIKNESHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGELYFSDVYTSLELPEEIRTHKVLWGECLGGA
LYWKELAVLAQKIGFCPPRLVTANLITIQNKELERVIGDCRFVSATFRLFKHSKTGPTKRCQVIYNGGIT
GHEKELMFDANFTFKEGEIVEVDEETAAILKNSRFAQDFLIRPIGEKLPTSGGCSALELKDIITDPFKLA
EESDSMKSRCVPDAAGGCCGTKKSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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