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Report for CCDS32579.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32579.1 Public Homo sapiens 17 FLCN 24 110 108 CCDS HistoryNCBI Gene:201163Re-query CCDS DB by CCDS ID:32579.1Re-query CCDS DB by GeneID:201163See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32579.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285071.9 ENSP00000285071.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000285071.9Link to Ensembl Protein Viewer:ENSP00000285071.4Re-query CCDS DB by Nucleotide ID:ENST00000285071Re-query CCDS DB by Protein ID:ENSP00000285071
Original member Current member NCBI NM_001353230.2 NP_001340159.1 Accepted alive Link to Nucleotide Sequence:NM_001353230.2Link to Protein Sequence:NP_001340159.1Re-query CCDS DB by Nucleotide ID:NM_001353230Re-query CCDS DB by Protein ID:NP_001340159Link to BLAST:NP_001340159.1
Original member Current member NCBI NM_001353231.2 NP_001340160.1 Accepted alive Link to Nucleotide Sequence:NM_001353231.2Link to Protein Sequence:NP_001340160.1Re-query CCDS DB by Nucleotide ID:NM_001353231Re-query CCDS DB by Protein ID:NP_001340160Link to BLAST:NP_001340160.1
Original member Current member NCBI NM_144997.7 NP_659434.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144997.7Link to Protein Sequence:NP_659434.2Re-query CCDS DB by Nucleotide ID:NM_144997Re-query CCDS DB by Protein ID:NP_659434Link to BLAST:NP_659434.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001340159.1 579 Q8NFG4-1 579 100% 0 0
NP_001340160.1 579 Q8NFG4-1 579 100% 0 0
NP_659434.2 579 Q8NFG4-1 579 100% 0 0

Chromosomal Locations for CCDS 32579.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 17213655 17213856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17214985 17215090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17215185 17215316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17216380 17216503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17217069 17217182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17219019 17219209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17221537 17221628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17222501 17222661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17223922 17224143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17226176 17226322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17227889 17228137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1740 nt):
ATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTCTCTTCTGCACGGAGG
TGCTGCACGCCCCACTTCCTCAAGGGGATGGGAATGAGGACAGTCCTGGCCAGGGTGAGCAGGCGGAAGA
AGAGGAAGGTGGCATTCAGATGAACAGTCGGATGCGTGCGCACAGCCCCGCAGAGGGGGCCAGCGTCGAG
TCCAGCAGCCCGGGGCCCAAAAAGTCGGACATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCACCCGG
GATATATCAGCCATGATAAAGAGACCTCCATTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCT
CTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAGCCTGAGCTGTGAGGTCTGCCCTGGCCGTGAAGGCCCC
ATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAGGACAGCCTGGCCA
GGGGCTTCCAGCGCTGGTACAGCATCATCACCATCATGATGGACCGGATCTACCTCATCAACTCCTGGCC
CTTCCTGCTGGGGAAGGTCCGGGGAATCATCGATGAGCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCA
GAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCATTCCTACACCAGAGGA
ACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTC
CTTTGCCTGGCTCCTGAAGGCGTGTGGCAGCCGGCTGACCGAGAAGCTCCTGGAAGGTGCTCCGACCGAG
GATACCTTGGTCCAGATGGAGAAGCTCGCTGATTTAGAAGAGGAATCAGAAAGCTGGGACAACTCTGAGG
CTGAAGAGGAGGAGAAAGCCCCTGTGTTGCCAGAGAGTACAGAAGGGCGGGAGCTGACCCAGGGCCCGGC
AGAGTCCTCCTCTCTCTCAGGCTGTGGGAGCTGGCAGCCCCGGAAGCTGCCAGTCTTCAAGTCCCTCCGG
CACATGAGGCAGGTCCTGGGTGCCCCTTCTTTCCGCATGCTGGCCTGGCACGTTCTCATGGGGAACCAGG
TGATCTGGAAAAGCAGAGACGTGGACCTCGTCCAGTCAGCTTTTGAAGTACTTCGGACCATGCTTCCCGT
GGGCTGCGTCCGCATCATCCCATACAGCAGCCAGTACGAGGAGGCCTATCGGTGCAACTTCCTGGGGCTC
AGCCCGCACGTGCAGATCCCCCCCCACGTGCTCTCCTCAGAGTTTGCTGTCATCGTGGAGGTCCACGCAG
CCGCACGTTCCACCCTCCACCCTGTGGGGTGTGAGGATGACCAGTCTCTCAGCAAGTACGAGTTTGTGGT
GACCAGTGGGAGCCCTGTAGCTGCAGACCGAGTGGGCCCCACCATCCTGAATAAGATTGAAGCGGCTCTG
ACCAACCAGAACCTGTCTGTGGATGTGGTGGACCAGTGCCTCGTCTGCCTCAAGGAGGAGTGGATGAACA
AAGTGAAGGTGCTTTTTAAGTTCACCAAGGTGGACAGTCGACCCAAAGAGGACACACAGAAGCTGCTGAG
CATCCTGGGTGCGTCCGAGGAGGACAATGTCAAGCTGCTGAAGTTCTGGATGACTGGCCTGAGCAAGACC
TACAAGTCACACCTCATGTCCACGGTCCGCAGCCCCACAGCCTCGGAGTCTCGGAACTGA

Translation (579 aa):
MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVE
SSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGP
IFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEA
EQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEGAPTE
DTLVQMEKLADLEEESESWDNSEAEEEEKAPVLPESTEGRELTQGPAESSSLSGCGSWQPRKLPVFKSLR
HMRQVLGAPSFRMLAWHVLMGNQVIWKSRDVDLVQSAFEVLRTMLPVGCVRIIPYSSQYEEAYRCNFLGL
SPHVQIPPHVLSSEFAVIVEVHAAARSTLHPVGCEDDQSLSKYEFVVTSGSPVAADRVGPTILNKIEAAL
TNQNLSVDVVDQCLVCLKEEWMNKVKVLFKFTKVDSRPKEDTQKLLSILGASEEDNVKLLKFWMTGLSKT
YKSHLMSTVRSPTASESRN


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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