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Report for CCDS8205.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8205.1 Public Homo sapiens 11 IL18BP 24 110 108 CCDS HistoryNCBI Gene:10068Re-query CCDS DB by CCDS ID:8205.1Re-query CCDS DB by GeneID:10068See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8205.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343898.9 ENSP00000343309.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000343898.9Link to Ensembl Protein Viewer:ENSP00000343309.5Re-query CCDS DB by Nucleotide ID:ENST00000343898Re-query CCDS DB by Protein ID:ENSP00000343309
Original member Current member EBI ENST00000620017.4 ENSP00000480621.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620017.4Link to Ensembl Protein Viewer:ENSP00000480621.1Re-query CCDS DB by Nucleotide ID:ENST00000620017Re-query CCDS DB by Protein ID:ENSP00000480621
Original member Current member NCBI NM_173044.3 NP_766632.2 Accepted alive Link to Nucleotide Sequence:NM_173044.3Link to Protein Sequence:NP_766632.2Re-query CCDS DB by Nucleotide ID:NM_173044Re-query CCDS DB by Protein ID:NP_766632Link to BLAST:NP_766632.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766632.2 163 O95998-4 163 100% 0 0

Chromosomal Locations for CCDS 8205.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 71999985 72000012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72000351 72000557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72001201 72001324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72001405 72001424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72001784 72001896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGACCATGAGACACAACTGGACACCAGACCTCAGCCCTTTGTGGGTCCTGCTCCTGTGTGCCCACGTCG
TCACTCTCCTGGTCAGAGCCACACCTGTCTCGCAGACCACCACAGCTGCCACTGCCTCAGTTAGAAGCAC
AAAGGACCCCTGCCCCTCCCAGCCCCCAGTGTTCCCAGCAGCTAAGCAGTGTCCAGCATTGGAAGTGACC
TGGCCAGAGGTGGAAGTGCCACTGAATGGAACGCTGAGCTTATCCTGTGTGGCCTGCAGCCGCTTCCCCA
ACTTCAGCATCCTCTACTGGCTGGGCAATGGTTCCTTCATTGAGCACCTCCCAGGCCGACTGTGGGAGGG
GAGCACCAGCCGGGAACGTGGGAGCACAGGCTGGGCTGAGGGCAACCTTGCCCCCCACCCAAGAAGCCCT
GCCCTCCAGCCACAGCAGTCCACAGCAGCAGGGTTAAGACTCAGCACAGGGCCAGCAGCAGCACAACCTT
GA

Translation (163 aa):
MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPAAKQCPALEVT
WPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTSRERGSTGWAEGNLAPHPRSP
ALQPQQSTAAGLRLSTGPAAAQP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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